Gene Information

Name : Alide2_3071 (Alide2_3071)
Accession : YP_004388933.1
Strain : Alicycliphilus denitrificans K601
Genome accession: NC_015422
Putative virulence/resistance : Virulence
Product : phage transcriptional regulator AlpA
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 3210462 - 3210644 bp
Length : 183 bp
Strand : -
Note : PFAM: Prophage CP4-57 regulatory; KEGG: ppg:PputGB1_4755 phage transcriptional regulator, AlpA

DNA sequence :
ATGCGTATCTTGCGACTACCTGCAGTGAGTGAATTGACGGGACTGCCACGGTCCACGTTGTATCTGTACATGAGCAAGGG
CATCTTCCCAAAGCCCATAAAGCTCGGCGTCAAATCTGTCGGTTGGATCCAGGAGGAGGTGGACCAGTGGCTGCGTCAGA
AAATGGAATCGCGGGCTTCTTAA

Protein sequence :
MRILRLPAVSELTGLPRSTLYLYMSKGIFPKPIKLGVKSVGWIQEEVDQWLRQKMESRAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 1e-09 49
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 2e-11 48
unnamed CAA21398.1 - Not tested HPI Protein 2e-11 48
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 7e-09 44
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 7e-09 44
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 5e-09 44
ORF C109 AAN62202.1 phage-related protein Not tested PAGI-2(C) Protein 2e-09 42
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 1e-10 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Alide2_3071 YP_004388933.1 phage transcriptional regulator AlpA VFG1118 Protein 2e-09 44