Gene Information

Name : Alide2_3057 (Alide2_3057)
Accession : YP_004388919.1
Strain : Alicycliphilus denitrificans K601
Genome accession: NC_015422
Putative virulence/resistance : Unknown
Product : transposase IS66
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 3196333 - 3197847 bp
Length : 1515 bp
Strand : -
Note : PFAM: Transposase, IS66; KEGG: dia:Dtpsy_2523 transposase IS66

DNA sequence :
ATGGTGATCGACGAGCAAGCCCTGAGCGAACTGGACGCAGAGCAACTGCGCGAAGTGACCCAGCGCCTGCTGGCCGAACT
GCGTCACCAGCGCGCGCTCAACGAGAAGCTCACCTATGAGTGCGCGCTGCTCAAGCGGCTGAAGTTCGCCGCCCAATCCG
AGCGGCACAGCGCCGATCAGAAGAGCCTGCTGGAAGACGAGATCGATGCCGACCTGGCGGCGGTCGCTGTCGAGATTGAG
CAACTCCAGCCGCCTGCGGCTGCGCCCGAAGCCAAGCAACAGCCCAAACGCCAGCCGCTGCCGGCCCACCTGCCGCGCCG
CGAAATCCGCCACGAGCCTGAGTCGACCACCTGCGCCTGTGGCTGCCGGATGCAGCGCATCGGCGAAGACGTGGCCGAGA
AGCTGGACTACGTGCCCGGCGTGTTTACCGTGGAGCGCTACATCCGTGGCAAGTGGGCGTGCACCCAGTGCGAAACTATC
ACCCAGGCGCCGGTCGAGGCCCATGTGATCGATAAAGGCATCCCGACTGCCGGCCTGCTGGCCCAAGTGCTGGTGGCCAA
GTACCAGGATCACCAGCCCTTGTACCGGCAGGAGAACATCTTTGGTCGCGCCGGCCTGGCGATTCCAAGATCCACCCTGG
CGCAGTGGGTAGGCACCTGCGGTGCGCGGCTGCAACCGCTGGTCGATGCCCTGAAGGCCGAGGTGCTCGGCCACCGGGTG
TTGCACGGTGATGAGACCCCGGTGGCCATGCTCAAGCCGGGCAGCGGTAAAACGCACCGGGCCTACCTGTGGGCCTATGC
CCCGGGAGCGTTTGAAGCCACGCGGGCCGTGGTCTATGACTTCTGCGAGTCCCGCGCCGGAGAACACGCCCGCGCCTTTC
TGGGGGACTGGCGCGGCAGCCTGATCTGTGACGACTATGCCGGCTACAAGGCCAGCTTTAGCCAGGGCGTGACCGAAGCC
GGTTGCCTGGCACACGCCCGGCGCAAGTTCTTCGACCTGCACGCAGCGGGCAAGAGCCAGATCGCCGAATTGGCCCTGAT
GCAGTTCGCCCGGGTCTATGAGATCGAACGGCAAGTTCAGCCCCTGGCGGCACCAGAGCGGTTGCAGGTGCGCCAGCAGC
ACAGTCGGCCCATTCTGGACGCGTTGCACCAGTGGATGGTGCTGCAACGCCAGCAGGTGGCGGGCAACTCGGCGACGGCC
AAGGCGCTGGACTACAGCCTCAAGCGCTGGGCAGCGCTCACGCGCTTCGTCGATGACCCGCAGCTGCCGCCGGACAACAA
TTGGATCGAAAACCAGATCAGGCCTGTGGCCCTGGGGCGCTCGAACTGGTTGTTCGCCGGCAGCTTGCGCGCGGGCCAGC
GGGCGGCCGCCGTGATGAGCCTGATCCAGTCAGCGCGCATGAACGGGCACGACCCATATGCCTATCTCAAGGATGTGCTG
ACCCGGCTGCCCACGCACAAGGCCAGCCGGATTGAAGAACTGCTGCCGCATCGCTGGCAACCCATCGATATCTGA

Protein sequence :
MVIDEQALSELDAEQLREVTQRLLAELRHQRALNEKLTYECALLKRLKFAAQSERHSADQKSLLEDEIDADLAAVAVEIE
QLQPPAAAPEAKQQPKRQPLPAHLPRREIRHEPESTTCACGCRMQRIGEDVAEKLDYVPGVFTVERYIRGKWACTQCETI
TQAPVEAHVIDKGIPTAGLLAQVLVAKYQDHQPLYRQENIFGRAGLAIPRSTLAQWVGTCGARLQPLVDALKAEVLGHRV
LHGDETPVAMLKPGSGKTHRAYLWAYAPGAFEATRAVVYDFCESRAGEHARAFLGDWRGSLICDDYAGYKASFSQGVTEA
GCLAHARRKFFDLHAAGKSQIAELALMQFARVYEIERQVQPLAAPERLQVRQQHSRPILDALHQWMVLQRQQVAGNSATA
KALDYSLKRWAALTRFVDDPQLPPDNNWIENQIRPVALGRSNWLFAGSLRAGQRAAAVMSLIQSARMNGHDPYAYLKDVL
TRLPTHKASRIEELLPHRWQPIDI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 3e-150 66
tnpC AEZ06051.1 transposase Not tested Tn6167 Protein 1e-129 52
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-66 41
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 2e-71 41
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 8e-73 41
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 2e-72 41
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 2e-72 41
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 1e-72 41
unnamed AAC31494.1 L0015 Not tested LEE Protein 2e-72 41
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 2e-72 41
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 2e-71 41
tnp AEA34686.1 transposase Not tested Not named Protein 1e-72 41
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 2e-71 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Alide2_3057 YP_004388919.1 transposase IS66 VFG1700 Protein 1e-66 41
Alide2_3057 YP_004388919.1 transposase IS66 VFG0793 Protein 1e-72 41