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Name : Alide2_3043 (Alide2_3043) Accession : YP_004388906.1 Strain : Alicycliphilus denitrificans K601 Genome accession: NC_015422 Putative virulence/resistance : Virulence Product : lysine decarboxylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : 4.1.1.18 Position : 3181813 - 3184173 bp Length : 2361 bp Strand : - Note : KEGG: ajs:Ajs_2762 ornithine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase, major domain; Orn/Lys/Arg decarboxylase, N-terminal; Orn/Lys/Arg decarboxylase, C-terminal DNA sequence : ATGAAATTCCGCTTTCCCATCGTCATCATCGACGAGGACTATCGTTCGGAGAACACCTCCGGCCTGGGCATCCGTGCGCT GGCGCAGGCCATCGAGGCCGAGGGCTTCGAGGTGCTGGGCGTGACCAGCTACGGCGACCTGTCGCAGTTCGCCCAGCAGC AAAGCCGGGCCAGCGCCTTCATCCTGTCGATCGACGACGAGGAGTTCACGCTGGGCACGGGGCAGGACCCCATCATCCAC AGCCTGCGCAGCTTCATCACGGAGGTGCGGCGCAAGAACGCCGAGGTGCCGATCTACGTGCACGGCGAGACCAAGACCGC GCGCCACCTGCCCAACGACATCCTGCGCGAGCTGCACGGCTTCATCCACATGTTCGAGGACACGCCCGAGTTCGTGGCCA AGCACATCATCCGCGAGGCCAAGAGCTACCTGGAGGGCGTGCAGCCGCCGTTCTTCAAGGCGCTGCTGGACTACGCCGAG GACGGCTCGTACAGCTGGCACTGCCCGGGCCACTCGGGCGGCGTGGCGTTCCTCAAGAGCCCCGTGGGCCAGATGTACCA CCAGTTCTACGGCGAGAACATGCTGCGCGCCGACGTGTGCAACGCCGTGGAGGAACTGGGCCAGCTGCTGGACCACAACG GCGCCATCGGCGAGAGCGAGCGCAACGCGGCGCGCATCTTCAATGCCGACCATTGCTTCTTCGTGACCAACGGCACCAGC ACGTCCAACAAGATGGTCTGGCACCACACGGTGGCGCCGGGCGACGTGGTGGTGGTGGACCGCAACTGCCACAAGTCCAT CCTGCACAGCATCATCATGACCGGGGCCATCCCCGTGTTCCTCAAGCCCACGCGCAACCACTTCGGCATCATCGGCCCGA TCCCTCAAGCTGAGTTCGATCCCGCCACCATCCAGGCCAAGATCCGCGCCAACCCGCTGCTCAAGGGCGTGGACGCCAAG ACCGTCAAGCCGCGCGTGCTGACCCTCACGCAATCGACCTACGACGGCGTGCTCTACAACACCGAGACCATCAAGGGCAT GCTCGACGGTTACGTGGACAACCTGCACTTCGACGAGGCCTGGCTGCCGCACGCGGCCTTCCACCCGTTCTACGGCAGCT TCCACGCCATGGGCAAGAAGCGCGCGCGGCCCAGGCATTCGGTGGTCTACGCCACGCAGTCCATCCACAAGCTGCTGGCC GGCATCAGCCAGGCGTCGCACGTGCTGGTGCAGGACTCGCAGACCACCAAGCTCGACCGCCACCTCTTCAACGAGGCCTA CCTGATGCACACCTCCACGTCGCCGCAGTACAGCATCATCGCCAGCTGCGACGTGGCCGCCGCGATGATGGAGCCGCCCG GCGGCACGGCGCTGGTGGAGGAAAGCCTGGTGGAGGCCCTGGACTTCCGCCGCGCCATGCGCCAGGTGGAGGACGAGTTC GGCAAGGATGACTGGTGGTTCAAGGTCTGGGGCCCCAACGAACTGGTCGACGACGGCCTGGGCACGGCCGAGAGCTGGAT CTTCCGCAACAAGGGCAAGAAGAAGAACGGCGCGGCCCGGTGGCACGGCTTCGGCGACCTGGCCGACGGCTTCAACATGC TGGACCCGATCAAGTCGACGATCGTCACGCCCGGCCTGAACCTGGACGGCAAGTTCGACAAGACCGGCATCCCCGCCAGC ATCGTCACCAAGTACCTTGCCGAGCACGGCGTGGTGGTGGAGAAGACGGGCCTGTACAGCTTCTTCATCATGTTCACCAT CGGCATCACCAAGGGCCGCTGGAACACGCTGCTGGCCGCGCTGCAGCAGTTCAAGGACGACTACGAGAAGAACCAGCCCA TGTGGCGCATCCTTCCCGAGTTCTGCCAGCAGCACAAGCGCTACGAGCGCATGGGCCTCAAGGACCTGTGCCAGCACGTG CACCAGCTCTACGCCAAGTACGACATCGCGCGCCTGACGACCGAGATGTACCTCTCGGACCTCACGCCCGCGATGAAGCC CAGCGACGCCTACGCCCACATCGCCCAGCGCAAGACCGAGCGCGTGGCCATCGACCAGCTGGAAGGCCGCATCACCACGA GCCTGATCACGCCGTACCCGCCGGGCATCCCGCTCCTGATCCCGGGCGAGGTGTTCAACAAGAAGATCGTGGACTACCTG AAGTTCGCACGCGAGTTCGCCAAGCTCTGCCCGGGCTTCGAGACCGACATCCACGGCCTGGTGGAGATCGAGGACGACCA CGGCAACGTGAGCTACTACGCCGACTGCGTGGCCGAAACGGGCCGCGCGGCCAACGCCCCCAGGCCCAAGGGCAAGCTGG TCCAGGTGGGGGACGACGGGCCTTTCGGGCGCACGCTCTGA Protein sequence : MKFRFPIVIIDEDYRSENTSGLGIRALAQAIEAEGFEVLGVTSYGDLSQFAQQQSRASAFILSIDDEEFTLGTGQDPIIH SLRSFITEVRRKNAEVPIYVHGETKTARHLPNDILRELHGFIHMFEDTPEFVAKHIIREAKSYLEGVQPPFFKALLDYAE DGSYSWHCPGHSGGVAFLKSPVGQMYHQFYGENMLRADVCNAVEELGQLLDHNGAIGESERNAARIFNADHCFFVTNGTS TSNKMVWHHTVAPGDVVVVDRNCHKSILHSIIMTGAIPVFLKPTRNHFGIIGPIPQAEFDPATIQAKIRANPLLKGVDAK TVKPRVLTLTQSTYDGVLYNTETIKGMLDGYVDNLHFDEAWLPHAAFHPFYGSFHAMGKKRARPRHSVVYATQSIHKLLA GISQASHVLVQDSQTTKLDRHLFNEAYLMHTSTSPQYSIIASCDVAAAMMEPPGGTALVEESLVEALDFRRAMRQVEDEF GKDDWWFKVWGPNELVDDGLGTAESWIFRNKGKKKNGAARWHGFGDLADGFNMLDPIKSTIVTPGLNLDGKFDKTGIPAS IVTKYLAEHGVVVEKTGLYSFFIMFTIGITKGRWNTLLAALQQFKDDYEKNQPMWRILPEFCQQHKRYERMGLKDLCQHV HQLYAKYDIARLTTEMYLSDLTPAMKPSDAYAHIAQRKTERVAIDQLEGRITTSLITPYPPGIPLLIPGEVFNKKIVDYL KFAREFAKLCPGFETDIHGLVEIEDDHGNVSYYADCVAETGRAANAPRPKGKLVQVGDDGPFGRTL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 3e-104 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Alide2_3043 | YP_004388906.1 | lysine decarboxylase | VFG1670 | Protein | 2e-104 | 41 |
