Gene Information

Name : Alide2_3033 (Alide2_3033)
Accession : YP_004388896.1
Strain : Alicycliphilus denitrificans K601
Genome accession: NC_015422
Putative virulence/resistance : Unknown
Product : Nickel-transporting ATPase, polyamine-transporting ATPase
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : 3.6.3.24
Position : 3171583 - 3173220 bp
Length : 1638 bp
Strand : -
Note : PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: dia:Dtpsy_1915 ABC transporter related; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGCGCGCCACCGCTCCGATGAACCCCCAGACACCGCCGCTGCTGCAGGTGCAGGACCTGCGCGTGCGCTTCGGCGCCAA
GGAAGTGGTGCATGGCGTGAGCTTCAACATCGCCCCCGGCGAAAAGCTCGCGCTGGTGGGCGAATCGGGCTCGGGCAAGA
CGGTGACGGCGCTGGCGCTGCTGCGCCTGGCGGGCGACGCGCAGCTCGAAGGCCGCGCGCTGATGCAGGGGCGCGACCTG
CTGCAGCTACCCGAGCGCGAGCTGCGCGGCGTGCGCGGCGGCGACATCGCCATGGTGTTCCAGGAGCCCATGACGGCGCT
CAACCCGCTCATGCCCGTGGGCGAGCAGGTGGCCGAGGTCTTGATGCTGAAACAGGCCCTGACGCAAGCACAGAGCGCGC
AAGCAGCTATCGAATTGCTAGCTAGCACGGGCATTCCCGAGCCCGCGCGGCGCGCCGGGAGCTTCCCGCACCAGCTCTCG
GGCGGGCAGCGCCAGCGCGCCATGATCGCCATGGCGCTGGCCAGCCGCCCCCGGCTGCTGCTGGCCGACGAGCCCACCAC
GGCGCTGGACGTGACGCTGCGCGGCCAGATCCTGGATCTGCTGTCCGACCTGCAGCGCCAGACTGGCATGGCCGTGCTGC
TCATCACGCACGACCTGAACCTGGTGCGCCGCTTCGCCGACCGCGTGGCGGTGATGGAGCAGGGCGCGCTGGTGGAGCAG
GGCACGGTGGCCCAGGTGTTCGGCGCGCCGCGCCATGACTACACGCGCCGCCTGATCGGCAGCACGCCGCGGCGCGACGT
GGCCGAGGGCGCGCCGGCCGAAGGCGCCGTGCCCGCGGCGCAGGCCGGGGCCTTGAGCGTGGCCTATCCCGTGCCCCTGC
CGGGCTTTCGCGGCTGGTTTTCCAAGGGCGAGTTCGTGGCCGTGAAGGGCGTGGGCTTTCGCATCCAGCACGCGCGCACC
CTGGGCGTGGTGGGCGAGTCGGGCTCGGGCAAGTCCACCCTGGCCCAGGCCCTGCTGGGCCTGCTGCCCGCGCGCGGCGA
ACTGCAGGTGGCGGGCCAGTCCTGGCAGCAGCCCGCGCAACACAACAGCACGCACAACCAGCTGCTGCGCCGGCAGGTGC
AGGTGGTGTTCCAGGACCCGTTCTCGTCGCTGTCGCCGCGTATGACCGTGGAGGAAATCGTGGGCGAGGGCCTGCACGTG
CATGAACCCCGGCTTCCCGTCCCCGAGCGCCGCTCCCGCGTGGCCGCCATGCTGGCCGAGGTGGGGCTCACCGAGGCGCA
GTTCCCCGGGTTGCTCTCGCGCTATCCGCATGAGTTCTCGGGCGGCCAGCGCCAGCGCCTGGCCATCGCGCGCGCCCTGA
TCCTGCAGCCGCAGCTGCTGGTGCTGGACGAGCCCACGAGCGCGCTGGACGTGACCATCCAGCAGCAGGTGCTGGGCCTG
CTGCAGCGCCTGCAGAAGGAGCGCGCGCTGTCGTACCTGCTCATCACGCACGACGTGGCGGTGGTGCGCGCCATGGCGCA
CGAGGTCCTCGTGATGAAGGACGGCGAGGTGGTGGAAAGCGGCAGCGTGCGGCAGGTGCTGGATGCGCCGCGCCACCCGT
ACACGCAGCGGCTGGTGGAGGCGGCGCGGCCGTTGTGA

Protein sequence :
MRATAPMNPQTPPLLQVQDLRVRFGAKEVVHGVSFNIAPGEKLALVGESGSGKTVTALALLRLAGDAQLEGRALMQGRDL
LQLPERELRGVRGGDIAMVFQEPMTALNPLMPVGEQVAEVLMLKQALTQAQSAQAAIELLASTGIPEPARRAGSFPHQLS
GGQRQRAMIAMALASRPRLLLADEPTTALDVTLRGQILDLLSDLQRQTGMAVLLITHDLNLVRRFADRVAVMEQGALVEQ
GTVAQVFGAPRHDYTRRLIGSTPRRDVAEGAPAEGAVPAAQAGALSVAYPVPLPGFRGWFSKGEFVAVKGVGFRIQHART
LGVVGESGSGKSTLAQALLGLLPARGELQVAGQSWQQPAQHNSTHNQLLRRQVQVVFQDPFSSLSPRMTVEEIVGEGLHV
HEPRLPVPERRSRVAAMLAEVGLTEAQFPGLLSRYPHEFSGGQRQRLAIARALILQPQLLVLDEPTSALDVTIQQQVLGL
LQRLQKERALSYLLITHDVAVVRAMAHEVLVMKDGEVVESGSVRQVLDAPRHPYTQRLVEAARPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-73 42
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-73 42
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 5e-73 42
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-73 42