Gene Information

Name : Alide2_2067 (Alide2_2067)
Accession : YP_004387957.1
Strain : Alicycliphilus denitrificans K601
Genome accession: NC_015422
Putative virulence/resistance : Unknown
Product : DNA-directed DNA polymerase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0389
EC number : 2.7.7.7
Position : 2162017 - 2163303 bp
Length : 1287 bp
Strand : +
Note : KEGG: tin:Tint_2912 DNA-directed DNA polymerase; PFAM: DNA-repair protein, UmuC-like

DNA sequence :
ATGTTTGCGCTGATCGACGGCAACAACTTTTATGCGAGCTGCGAGCGGGTTTTCCAGCCCGAGCTGCGCGGGCGGCCCCT
TGTCGTGCTATCCAACAACGACGGCTGTGCCATCGCCCGCAGTGACGAAGCCAAGGCCCTGGGCGTGAAGATGGGCCAGG
CCATCCACCAGGTGGCGCCAGACGTGCGCAAGCAACTGGCCGTCCGGTCGGCCAATTTTGCGCTGTACGGCGACATGAGC
GCGCGGGTGCTGGCCATCCTGCGCGACGCGGCGCCGCGTGTGGAGCCGTACAGCATCGACGAGTCGTTTCTCGACCTGAC
CGGCATGCGGGATCGTGAAGCGTTTGCCCGCGAGCTGCACGAGCGCGTGCATCGCTGGACGGGTATCCCCAACTGCGTTG
GCATCGGCGCGACCAAGACGCTGGCCAAGCTCGGCAATTTCGTGGCCAAGAGCTCAGTCCGCAAACCTGGCAGTTATCCG
GCGTCGCTCAGCGGCGTGGCCGATCTGGCGGCGCTGTCGCCGCAGGCCCTGGCCGAGGTGCTCACCGCCACGCCCGTGGG
CGAACTGTGGGGCGTTGGGCCGCGCTGGTCGGCACGGCTGCGTGAACTGGGCATAGCGACGGCGCTGCAACTGCGTGATG
CGCAGCGCGACCTGATTCTAGAGAGGTTCGGCGTGGTGCTCTCGCGCACCCAGCGTGAGCTGTCGGGCGATCCTTGCCTT
GCGTTGGAGGAAGTAGAACCCGACCGCCAACAAATCATGGTCAGTCGATCCTTCGGCGAGCGCGTCGAGAATCACCAGTC
CATCAGCGAGGCCTTCGCCACATTCGCCGTGCGCGCCTGCGAGAAGTTGCGCGCTCGTGGCCTCGTGACCGGCGCTATCG
GCATCTTCGCCAACACCGACCACTTCCGCCTCGAGCTGCGCCAGCACCATCCGCAACGCACGACCGATCTACCGCGCGCC
ACCAGCGATACCCGCGTAGTGCTCGACACCCTGCGTCGGATGCAGCGGGGCTTCCTCAAGGACGGATTCGCGTACAAGAA
GGCCGGTGTGTGGTTGATGGATTTGGGCCGCCCCGAACAGATTCAGCCTGATCTCTTCGCGCCGAGCACCATCGGCAACG
ACAAGCTGATGTCCGCGATGGACGCGATCAACCGACGCTACGGGCGCGGCACCGTGGGCTTGGGTGCAACCGGCTGGCGG
GAACGTCCACAGTGGGGTATGCGGCAGGCAAACCTCTCGCTGCACTTCACCACGTCATTGCGCGACCTGCCGCGCGCGCA
TTGTTAA

Protein sequence :
MFALIDGNNFYASCERVFQPELRGRPLVVLSNNDGCAIARSDEAKALGVKMGQAIHQVAPDVRKQLAVRSANFALYGDMS
ARVLAILRDAAPRVEPYSIDESFLDLTGMRDREAFARELHERVHRWTGIPNCVGIGATKTLAKLGNFVAKSSVRKPGSYP
ASLSGVADLAALSPQALAEVLTATPVGELWGVGPRWSARLRELGIATALQLRDAQRDLILERFGVVLSRTQRELSGDPCL
ALEEVEPDRQQIMVSRSFGERVENHQSISEAFATFAVRACEKLRARGLVTGAIGIFANTDHFRLELRQHHPQRTTDLPRA
TSDTRVVLDTLRRMQRGFLKDGFAYKKAGVWLMDLGRPEQIQPDLFAPSTIGNDKLMSAMDAINRRYGRGTVGLGATGWR
ERPQWGMRQANLSLHFTTSLRDLPRAHC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rulB CAI36137.1 nucleotidyltransferase/DNA polymerase Not tested PPHGI-1 Protein 2e-67 43
samB NP_458681.1 UV protection protein Not tested SPI-7 Protein 6e-65 42
umuC NP_807889.1 DNA polymerase V subunit UmuC Not tested SPI-7 Protein 6e-65 42
unnamed ABR13403.1 DNA-directed DNA polymerase Not tested PAGI-5 Protein 9e-49 42