Gene Information

Name : Alide2_1988 (Alide2_1988)
Accession : YP_004387879.1
Strain : Alicycliphilus denitrificans K601
Genome accession: NC_015422
Putative virulence/resistance : Unknown
Product : phosphonate ABC transporter substrate-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG3221
EC number : -
Position : 2089432 - 2090292 bp
Length : 861 bp
Strand : -
Note : TIGRFAM: Phosphonate-binding periplasmic protein; KEGG: mms:mma_3041 phosphonate ABC-type transport system substrate-binding protein

DNA sequence :
ATGAAAAAACTCGCATCCGCATTAATGTCTGTCTTGCTTGCCGCCGTCTGCAGCATTGGCCATGCATCATCCAATCCCGA
TCCAGAAACGCTCAAAGTTGCGCTGCTGCCGGACGAAAACGCATCGACCGTAATTAAATACAACAAGCCGCTCGAAATCT
ATCTGGAAAAAGAGCTGGGAAAGAAAATTGAGCTGGTGGTTACCACTGATTACTCGTCAATGATCGAAGCCATGCGTCAC
GGCCGTATCGACATGGCATATTTTGGCCCCTTGTCGTATGTGCTGGCTAAGCAAAAGAGCGACATCGAGCCATTCGCAGC
GATGAAGCAAAAGGGTGGCACTACCTACCAGTCCGTATTGATCGCCAATACTGGCGCCGGCATCGCCAAAATCAGTGATA
TCGTCAACAAGAATGTCGCTTACGGTGATAAGGCATCCACCTCCAGCCATTTGATTCCGAAGTCGATATTGGCGGAAAAC
GGTTTGAAAGCCGGCGAAAACTATCGCGAACACTTTGCCGGTGCGCATGACGCGGTGGCCATGGCCGTGCAAAACGGTCA
CGCGCAGGCTGGCGGCTTGAGTAAGCCGATTTTTGAATCCCTGGTTCAGCGCGGACTGGTCGATCCCAACAAAGTAAAAG
TTCTTGCCGAATCGAAGCCATATCCGCAATACCCGTGGACCATGCGCAGCAATCTGAAGCCGGAACTGAAGGAAAAGATC
CGTGCAGCCTTCTTGAATCTCAAAGATCCGGAAGTCCTGAAACCTTTCAAAGCCGATGGTTTCGGCCCGATCAGCGACAA
AGACTATGACGTGGTGCGCAGCCTTGGCACACTGCTCAAGCTCGATCTGTCGAAGTTCTAA

Protein sequence :
MKKLASALMSVLLAAVCSIGHASSNPDPETLKVALLPDENASTVIKYNKPLEIYLEKELGKKIELVVTTDYSSMIEAMRH
GRIDMAYFGPLSYVLAKQKSDIEPFAAMKQKGGTTYQSVLIANTGAGIAKISDIVNKNVAYGDKASTSSHLIPKSILAEN
GLKAGENYREHFAGAHDAVAMAVQNGHAQAGGLSKPIFESLVQRGLVDPNKVKVLAESKPYPQYPWTMRSNLKPELKEKI
RAAFLNLKDPEVLKPFKADGFGPISDKDYDVVRSLGTLLKLDLSKF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13523.1 phosphonate binding periplasmic protein Not tested PAGI-7 Protein 1e-83 62