Gene Information

Name : Alide2_1965 (Alide2_1965)
Accession : YP_004387856.1
Strain : Alicycliphilus denitrificans K601
Genome accession: NC_015422
Putative virulence/resistance : Unknown
Product : helix-turn-helix domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 2063589 - 2063894 bp
Length : 306 bp
Strand : -
Note : KEGG: rpf:Rpic12D_0695 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3

DNA sequence :
ATGCAGAAGCGCCCGATTCAGAGAGGCCGACCCACCGGCACGACCACCTACGAAGCAGAACCAGCCATCGCGTTTGGGGC
CGCCGTTCGCGATGAGAGAACCAGCCAGGGCATCGCCCAGGAAACGCTGGCTCACCTGGCAGGCATCGAGCGCTCGCACG
TAGGCAAGATCGAGCGCGGCGAGCACACACCCACGCTCCCCTTGATCCTCAAGATTGCCCGTGCGCTGAAATGCAGTTCT
GCCCACCTGATGGCCCTGACCGAAGCCAAGCTGGCCGAACCGGCTCCCTCCAAGTCAGAGGACTGA

Protein sequence :
MQKRPIQRGRPTGTTTYEAEPAIAFGAAVRDERTSQGIAQETLAHLAGIERSHVGKIERGEHTPTLPLILKIARALKCSS
AHLMALTEAKLAEPAPSKSED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C3 AAN62096.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 5e-24 66