|
Name : Alide2_1958 (Alide2_1958) Accession : YP_004387849.1 Strain : Alicycliphilus denitrificans K601 Genome accession: NC_015422 Putative virulence/resistance : Unknown Product : integrating conjugative element protein Function : - COG functional category : - COG ID : - EC number : - Position : 2056807 - 2058207 bp Length : 1401 bp Strand : + Note : TIGRFAM: Integrating conjugative element protein, PFL4711; KEGG: rpf:Rpic12D_0688 hypothetical protein DNA sequence : ATGAAAACGTCTATCTCCCGTTGCGCGCAACGCGCCAAGCCCTACACGCTCAGCGTCGCGCTCGCCTGCGCCGTCACCGC CGGGGCCGGCGTCGCGTGGGCGCAGACCCGCATCAACCCGACCGGCGTCGGCGTGAGCGGCAGCGTGATCGGCGACGACG TGCTCTACAGCATCGGCGGCGGCCGCGCCGTGTCCATGGGTGGCGCCGGGAACATGCAGAGCATCGGTGTGGGCATCGGC TGGAACAGCAATCTCATCTGCGGCGACATGAGCATCACGACGACGCTGCAGAACCAATTGAACGGCATCACCAACGGCTT CCAGCAGATCATGAGCAACGTGATCCAGAGCGCGACCAGCGCGGTCGCCTCGCTGCCAGCGCTGATCATCCAGCGCGCCG ATCCGGGCCTCTACAACCTGCTGACCAACGGCGTGCTGCAGGCCCGGCTCGACTTCGACCGCAGCAAGCTGACGTGCAAG GCGATGGCCAACCGGATGGCGGACATGGCCGGCGGCCAAGCCGGATGGGATCAGCTCGCCGAAGGCTTCGCGCTGCGCGA TGCGGTGAGCAGCACCGATGCGGTGTCCGCCGTCGAGCAGGCCGAATCCAACAAGGGCAACAACGGCGTGCCCTGGGTCG GAGGCGGCAACGCGGGCGGTTCGGGCCAGGGCTCGATCAAGGTGGTCGGCGACGTGACCCGCGCCGGCTACAACCTGCTC AACAGCCGCGGCGTCACGGACACCTCGTCCATCCCGCGCGCATCCTGCGGCAACCGGCTGACCTGCCAAACCTGGTCCTC GCCGCAGGCCGCCGCGGACTTCGCGACCCGCGTCCTTGGTGAGCGCGAGCAACGCACCTGCGAGACCTGCACCAAGACGC AGACGACGCCCGGTGTCGGCCTGACGCCGGTGATCCAGGAAGAGTACGAGACCAAGCTGCAGGCGCTGCAGGGACTCGTG ACCGGCTCGACGCCGATGACGGTAGCGAACCTCGAAACCGCCGGCAGCAACTCCCTGCCGATCACGCGCGGCGTGATCGA GGCGCTGCGCGACGAACCCGATCAAGACCTGCTCGGCAAGCGCCTGGCGTCCGAGGCCGCGCTGTCGAGCGTGCTGGAGA AGGCCTTGCTGTTGCAGCGCACGCTGCTGACCGGCAAGAAGGAGCCCAACGTCGCCGCCAACGAGCTGGCCGTGAAGGCG GTCGATCAGGAGAACACTGCGCTGGAGCAGGAGATCAACAACCTCAAGACCGAGCTGGAGCTGCGGCGCACGCTGGCCGG CAATTCGGCGATGGCGATCGTGCAGCGGCACGGCACCCGCGCCGCCGGCTCGCGCGGCATCTTCGAGGGCGACACCACGC GCGACCGGCTCAAGGAAGTGCAGAAGCCGAGGAACAACTGA Protein sequence : MKTSISRCAQRAKPYTLSVALACAVTAGAGVAWAQTRINPTGVGVSGSVIGDDVLYSIGGGRAVSMGGAGNMQSIGVGIG WNSNLICGDMSITTTLQNQLNGITNGFQQIMSNVIQSATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLTCK AMANRMADMAGGQAGWDQLAEGFALRDAVSSTDAVSAVEQAESNKGNNGVPWVGGGNAGGSGQGSIKVVGDVTRAGYNLL NSRGVTDTSSIPRASCGNRLTCQTWSSPQAAADFATRVLGEREQRTCETCTKTQTTPGVGLTPVIQEEYETKLQALQGLV TGSTPMTVANLETAGSNSLPITRGVIEALRDEPDQDLLGKRLASEAALSSVLEKALLLQRTLLTGKKEPNVAANELAVKA VDQENTALEQEINNLKTELELRRTLAGNSAMAIVQRHGTRAAGSRGIFEGDTTRDRLKEVQKPRNN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF SG50 | AAN62272.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 4e-125 | 75 |
| ORF C42 | AAN62135.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 9e-124 | 74 |
| pph90 | CAI36131.1 | hypothetical protein | Not tested | PPHGI-1 | Protein | 1e-113 | 66 |
| unnamed | ABR13356.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 4e-107 | 65 |
| EXA19 | ABD94628.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 9e-109 | 65 |
| RL016 | AAP84143.1 | putative pathogenesis-related protein | Not tested | PAPI-1 | Protein | 1e-108 | 64 |
| unnamed | AAX39459.1 | unknown | Not tested | Hrp PAI | Protein | 2e-58 | 41 |
| YpsIP31758_3700 | YP_001402654.1 | hypothetical protein | Not tested | YAPI | Protein | 5e-56 | 41 |
