Gene Information

Name : Alide2_1918 (Alide2_1918)
Accession : YP_004387812.1
Strain : Alicycliphilus denitrificans K601
Genome accession: NC_015422
Putative virulence/resistance : Unknown
Product : integrating conjugative element protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2017786 - 2018715 bp
Length : 930 bp
Strand : +
Note : TIGRFAM: Integrating conjugative element protein, PFL4704; KEGG: rpf:Rpic12D_0680 hypothetical protein

DNA sequence :
ATGAAGCCCTTTGTGATGCGCCCGTTCGCTGCGGCCCTGGCCGGTCTGCTGCTGTGCCTGGCTTTCGTGCCTGCGGTCCA
TGCCGTCGAAATCCTGCGCTGGGAACGGCTGCCGCTGGCCGTGCCGCTGGTGGTCGGCCAGGAGCGCGTGGTGTTCATCG
AGCGCAACGTGCGCATCGGCGTGCCGGCCGGCATCGGCGAGCAGTTGCGCGTGCAGAGCGCCGGGGGGGCGATCTACCTG
CGCGCCAACGCGCCGATTCCACCCACACGGCTGCAACTGCAGGACGTGGAGTCGGGCGCGCTGATCCTGCTGGACATCGC
GGCCGAGCCGGCGAAGGCGGGCCAGCCCGCGCTCGAACCCGTGCGCATCGTCGAAGGCGACGTGCCGTCCACTCGCTATG
GCGAGCTGGTCAAGCCTACGGTGACGGCGGACGACGATGCGGAGCGCACCGTCACCACGGTGAAGCGCGCCACGCCGGTG
GCCGTCGTGCTCACGCGCTATGCGGCGCAGAACCTCTATGCGCCGCTGCGCACCGTGGAACCTGTCCCCGGCATCGGCCG
GGTCAACCTGCGGCGCGGCCTGGAGCTTTCCACCTTGCTGCCCACGCTGCCGGTGCGTGCGCAAGCGCTGGCCGCCTGGC
GGCTCGAAGACCAGTGGGTGACTGCGGTGAAGCTCACCAATGTCTCGGCACGCTTGCTTGATCTGGACCCGCGCGCGTTG
CAAGGCGACTTGCTCGCCGCGACCTTCCAGCACCCGAACCTGGCGCCGGCCGGCCGCGCTGCCGACACCACGGTGGTCTA
CCTCGTTACCCGTGGCCACGGCCTGGCCGAGTCGCTGCTGCCCAAGCTCTCACCGATCGACGCGACGGTGAACCTGCCGC
CGGCCGCGGCGGCCGGCCAGGCCGAAGGAGGTACCCGCCATGAAAAGTAA

Protein sequence :
MKPFVMRPFAAALAGLLLCLAFVPAVHAVEILRWERLPLAVPLVVGQERVVFIERNVRIGVPAGIGEQLRVQSAGGAIYL
RANAPIPPTRLQLQDVESGALILLDIAAEPAKAGQPALEPVRIVEGDVPSTRYGELVKPTVTADDDAERTVTTVKRATPV
AVVLTRYAAQNLYAPLRTVEPVPGIGRVNLRRGLELSTLLPTLPVRAQALAAWRLEDQWVTAVKLTNVSARLLDLDPRAL
QGDLLAATFQHPNLAPAGRAADTTVVYLVTRGHGLAESLLPKLSPIDATVNLPPAAAAGQAEGGTRHEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C50 AAN62144.1 hypothetical protein Not tested PAGI-2(C) Protein 4e-86 68
ORF SG60 AAN62282.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-72 65
EXA36 ABD94645.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-72 60
RL025 AAP84152.1 conserved hypothetical protein Not tested PAPI-1 Protein 7e-73 60
unnamed ABR13365.1 hypothetical protein Not tested PAGI-5 Protein 2e-72 60
pph81 CAI36122.1 hypothetical protein Not tested PPHGI-1 Protein 3e-74 59
PMI2580 YP_002152299.1 hypothetical protein Not tested Not named Protein 4e-54 49
STY4569 NP_458654.1 hypothetical protein Not tested SPI-7 Protein 2e-49 49
t4266 NP_807864.1 hypothetical protein Not tested SPI-7 Protein 2e-49 49
api36 CAF28510.1 hypothetical protein Not tested YAPI Protein 2e-51 47
YpsIP31758_3708 YP_001402662.1 hypothetical protein Not tested YAPI Protein 2e-51 47
YE3485 YP_001007644.1 hypothetical protein Not tested YAPI Protein 1e-50 46
Pmu_03100 YP_005176209.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 2e-47 41