Gene Information

Name : Alide2_1883 (Alide2_1883)
Accession : YP_004387777.1
Strain : Alicycliphilus denitrificans K601
Genome accession: NC_015422
Putative virulence/resistance : Unknown
Product : ssDNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 1989423 - 1989806 bp
Length : 384 bp
Strand : +
Note : PFAM: Primosome PriB/single-strand DNA-binding; KEGG: tmz:Tmz1t_0991 single-stranded DNA-binding protein

DNA sequence :
ATGAGCACGCACTTCGTCGGCGAGGGCAACATCGGTTCTGCGCCGGACTACCGCGAATTCCCGAACGGCAACGACGAGCC
GCGCCGGCTGCTTCGCTTGAACGTCTACTTCGACAACCCGATCCCGAAGAAGGACGGCGAGTACGAAGATCGCGGCGGCT
TCTGGGCGCCGGTGGAGCTGTGGCACCGCGACGCCGATCATTGGAAGACGCTGTATCAGAAGGGTATGCGGGTGCTGGTC
GAGGGCCGCACCGTGCGCGACGAATGGGAGGACGCCGACGAGAACGAGCGCGTCACGTTCAAGGTCGAGGCCCGGCGCGT
GGGCATCCTGCCGTACCGCATCGAGTCGGTGGCGCTCAGCGCCAAGCCGGCCGGCGGACAGTAG

Protein sequence :
MSTHFVGEGNIGSAPDYREFPNGNDEPRRLLRLNVYFDNPIPKKDGEYEDRGGFWAPVELWHRDADHWKTLYQKGMRVLV
EGRTVRDEWEDADENERVTFKVEARRVGILPYRIESVALSAKPAGGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb AAN62318.1 putative single-stranded DNA binding protein Not tested PAGI-3(SG) Protein 8e-51 87
ssb AAN62195.1 putative single-stranded DNA binding protein Not tested PAGI-2(C) Protein 3e-45 75
ssb CAI36053.1 single-stranded DNA-binding protein Not tested PPHGI-1 Protein 1e-32 61
ssb AAP84220.1 single strand DNA binding protein Not tested PAPI-1 Protein 1e-27 59
unnamed ABR13438.1 single-stranded DNA-binding protein 2 Not tested PAGI-5 Protein 1e-28 58