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Name : Alide2_1880 (Alide2_1880) Accession : YP_004387775.1 Strain : Alicycliphilus denitrificans K601 Genome accession: NC_015422 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 1987016 - 1988542 bp Length : 1527 bp Strand : - Note : PFAM: Integrase, catalytic core; KEGG: axy:AXYL_06593 integrase family protein 10 DNA sequence : GTGATAGACGTGGCAACACTGAGTGTCATCAGGCGCTGGGCCCTGCGAGAGCAGCTGTCCATCCGGGAGATAGCCCGCCG CACGGGCCTCTCGCGCAACACCATCCGCAAGTACCTGCGCGTAGGCGAGGCCGAGCCGCACTATGCCAAGCGGGTCAGTC CATCCAAGCTCGATCCCTTCGCCTTGAAGCTCGCTGGCTGGCTCAAGACGGAAGCTGGCCGATCCCGCAAGCAGCGCCGC ACCGTCAAGCAGATGTACGTGGATCTGCAGGCGCTCGGTTATGGCGGCTCCTACAACCGCGTAGCGGCCTTTGCCCGCCT CTGGCACGAGCAGCGCCTTGTGGCCCAGCAGACCACTGGCCGCGGCACCTTCGTTCCCCTGGCCTTCGGTCCGGGTGAGG CCTTCCAGTTCGACTGGAGCGAGGACTGGGCTGTTCTCGCCGGCGTGCGCACCAAGCTGCAGGTAGCCCACTTCAAGCTC AGCCACAGCCGAGCGTTCTACCTGCGCGCCTATCCGCTGCAAACGCACGAGATGCTGTTCGATGCCCACAACCATGCATT CGCAGTCCTGGGCGGTGTGCCCCGCCGTGGCATCTACGACAACATGCGCACCGCCGTAGACCGGGTGCGCCGTGGCAAGG AGCGCGACGTCAATGCGCGCTTTGCGGCCATGGTCAGCCACTTCCTGTTCGAGGCCGAGTTCTGCAATCCTGCTTCGGGC TGGGAGAAGGGCCAGGTGGAGAAGAACGTGCGCGATGCCCGCCATCGCCTGTGGCAGGTGGTGCCGCCATTCCTAAGCCT GTCCGATCTCAATGCCTGGCTTGAAGAGCGCTGCGTGGCGCTGTGGCACGAGATCGAGCACGGCAAGCTGCCGGGCACCG TCGCGGATGTCTGGGCTCAAGAGAAGGCAACCTTGATGCCGATGCCCCGGCCCTTCGATGGCTTTGTGGAGCACACCAAG CGCGTCTCACCCACCTGCTTGGTCCACTTCGAGCGCAATCGCTACAGCGTGCCGGCGCCGTATGCCAATCGACCGGTGAG CCTGCGGGTCTATGCCGATCGCCTGGTGGTCGCTGCCGAAGGCCAGATCGTGTGCGAGCATCAGCGCCTGATCGAGCGTA ACCACCATGGTGCGGGACAGACCGTGTACGACTGGCGCCACTACCTGGCAGTGCTGCAGCGCAAGCCCGGGGCCTTGCGC AATGGTGCTCCATTCCTGGAACTGCCAGCAGCCTTCAAGCGCCTGCAGGCCGCCCTCTTGAAGCAGCCAGGCGGCGACCG AGAGATGGTGGAGGTTCTGGCTCTGGTGCTGCACCACGATGAACAAGCTGTGCTCGCTGCAGTGGAGTTGGCACTGGAGT CAGGGGCTGCCAGCAAGACCCACATCCTGAACGTGCTGCACCGCCTGCTGGACGGTAAGCCCGCCCCAGCACCGGTCACC TCGCCCCAGGCCCTCAAGCTGTCTGTGGAACCCCAGGCCAACGTGCTGCGCTATGACCAATTGAGGGAGGTGCGCTATGC GTCATGA Protein sequence : MIDVATLSVIRRWALREQLSIREIARRTGLSRNTIRKYLRVGEAEPHYAKRVSPSKLDPFALKLAGWLKTEAGRSRKQRR TVKQMYVDLQALGYGGSYNRVAAFARLWHEQRLVAQQTTGRGTFVPLAFGPGEAFQFDWSEDWAVLAGVRTKLQVAHFKL SHSRAFYLRAYPLQTHEMLFDAHNHAFAVLGGVPRRGIYDNMRTAVDRVRRGKERDVNARFAAMVSHFLFEAEFCNPASG WEKGQVEKNVRDARHRLWQVVPPFLSLSDLNAWLEERCVALWHEIEHGKLPGTVADVWAQEKATLMPMPRPFDGFVEHTK RVSPTCLVHFERNRYSVPAPYANRPVSLRVYADRLVVAAEGQIVCEHQRLIERNHHGAGQTVYDWRHYLAVLQRKPGALR NGAPFLELPAAFKRLQAALLKQPGGDREMVEVLALVLHHDEQAVLAAVELALESGAASKTHILNVLHRLLDGKPAPAPVT SPQALKLSVEPQANVLRYDQLREVRYAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EC042_4098 | YP_006098381.1 | transposase | Not tested | Tn2411 | Protein | 8e-152 | 65 |
| unnamed | AAN85144.1 | unknown | Not tested | Hrp PAI | Protein | 8e-110 | 50 |
| istA | AAN62228.1 | putative transposase | Not tested | PAGI-3(SG) | Protein | 4e-92 | 45 |
