Gene Information

Name : Alide2_1831 (Alide2_1831)
Accession : YP_004387730.1
Strain : Alicycliphilus denitrificans K601
Genome accession: NC_015422
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1935843 - 1936472 bp
Length : 630 bp
Strand : +
Note : PFAM: Integrase, catalytic core; KEGG: rde:RD1_3452 transposase, putative

DNA sequence : 
GTGAAGTTCGGCTTCGTGGCGAAACACCGAGGGGCCTGGCCGGTCAATCTGATGTGCGAGGCGCTCGGTGTCTCGCGGGG
TGGCTTCTACGCGTGGCTCACACGGCCCAGGAGCCAGCGCAGCCTCAGCGATGAAGTGCTGGGCGCGCAGGTCCACCAGA
GCTTCGTGCGCAGCGACCGCACCTACGGCGCGCGCCGTGTGTGGCACGACGTGTTGGAGCAAGGTCAAGCCTGTGGTCTG
CACCGCATCGAGCGACTCATGCGAGAGCAGGCACTACGAGCCAGGCCCCGACGACGTGGACTGCCCAAGGACCGGGGCAC
GCGCAGCGCGGTGGCCGATAACGTGCTGGACCGCCAGTTCCGGGCCGATGGCCCGAACCAGAAGTGGGTAGCCGACTTCA
CCTACATCTGGACAGCCGAGGGCTGGCTGTACGTGGCGGCGGTGCTGGACCTGTACTCGCGGCGCATCGTGGGCTGGTCG
ATGCAGGAGAGCATGACCTCGCAGCTCGTGGTGGATGCGCTGATGATGGCCGTGTGGCGGCGAGGCAAGCCGGTGGCCTT
GTTGCATCACTCGGACCAGGGCAGCCAATACCAGCGTGAAGCGGCTCTGGATCGGGCCGGAGCTTCTTGA

Protein sequence : 
MKFGFVAKHRGAWPVNLMCEALGVSRGGFYAWLTRPRSQRSLSDEVLGAQVHQSFVRSDRTYGARRVWHDVLEQGQACGL
HRIERLMREQALRARPRRRGLPKDRGTRSAVADNVLDRQFRADGPNQKWVADFTYIWTAEGWLYVAAVLDLYSRRIVGWS
MQESMTSQLVVDALMMAVWRRGKPVALLHHSDQGSQYQREAALDRAGAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 1e-30 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Alide2_1831 YP_004387730.1 integrase catalytic subunit VFG1631 Protein 6e-31 42