Gene Information

Name : Alide2_1815 (Alide2_1815)
Accession : YP_004387717.1
Strain : Alicycliphilus denitrificans K601
Genome accession: NC_015422
Putative virulence/resistance : Unknown
Product : integrating conjugative element relaxase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1916822 - 1918666 bp
Length : 1845 bp
Strand : +
Note : KEGG: ajs:Ajs_2175 relaxase; TIGRFAM: Integrating conjugative element relaxase, PFGI-1 class; PFAM: Uncharacterised protein family, helicase/relaxase, putative; Domain of unknown function DUF1528, C-terminal

DNA sequence :
ATGCTCTCGCTGTTCCAGCGCAAACGGGTGCCACCCACCGCCGGCACGCCGCCCACCTCCGCCATCGAAACTCCGAAAGG
GTCGATGCGGCCGGAGTCGGCCGCATCGCTGCTGGCCACGCCGCGTCGACAGAAACTGCTGGAACACATCTGGCAGCGCA
CATCGCTCTCGCGCCGGCAGTTCGCCACGCTCTACCTCGCCCCACTGGAGCGCTACGCCGAGCTGGTCCAGCAGTTCCCG
GCCTCCGAGAGCCACCACCACGCCTACCCCGGCGGCATGCTGGATCACGGCCTGGAAATCGTCGCCTATGCGCTGAAGCT
GCGGCAGTCATACCTGCTGCCTGCGGGCGTCACGCCGGAGGCGCAGGCGGCCCAGGCCGAAGCCTGGACCGCAGGCACGG
CCTACGCGGCCCTGCTGCACGACATCGGCAAGATTGCGGTCGATCTGCACGTCGAGCATGCCGACGGCAGCGTCTGGCAT
CCCTGGCACGGCCCGCTGCGAAAGCCCTACCGCTTCCGTTACCGAAAGGAGCGCGAGTACCGCCTGCACAGCGCCGCCAC
CGGGCTGCTCTACGCGCGCCTTCTCGATCGGGACATCTTCGACTGGCTCAGCGGCTATCCCGACCTCTGGGCCGCGCTGC
TGTACGTGCTAGCCGGCCAGTACGAGCACGCCGGCACGCTCGGCGAGCTGGTCGTGCAGGCCGATCAGGCATCGGTCGCC
CAGGAACTCGGCGGTGATCCCAGCAAGGCGCTGGCGGCCCCCAAGCATGCGCTGCAACGCAAATTGCTCGACGGCTTGCG
CTACCTGCTCAAGGAAGAATTCAAGTTGAACCAAGCCGGCCCGGCGGACGGCTGGCTGACCCAGGACGCTCTGTGGCTGG
TGAGCAAGACCGTCTCCGACAAGCTGCGCGCACATCTGCTGTCGCAAGGCATCGACGGCATTCCGGCGAGCAATACGGCG
GTGTTCAACGTGCTGCAGGATCACGGCATCGTGCAACCGACGCCGGATGGCAAGGCGATCTGGAAGGCTACCATCACCAG
CGACGCCGGCTGGTCGCACGCCTTCACCTTCCTGAAGCTCTCGCCGGCGATGATCTGGGATGCCGCCGACCGGCCGGCGC
CGTTCGCAGGCTGTGTGCAGGTCGAAGAGGAACAGGCGGAGCCGCAGGCGCCGGCGGTGGCTGATGGGCCGCGCGTGGAA
GGCACCGAAGCTGCACCCGCGAGCGCGGCGCCGATCGCATCCGCAGCCATGGACACCGGCGTCGCAGCGCTGCTCGACCT
GCTGGGCGACACCGCTCCACCCGCGACACCGGAGATCCCGAGTTCCCCTGTTGCCGAGCCCGAGCCGGCCCCTTCGACCA
TGCCCCGGCCGCAGATGAGCCTCGCGCCTTCCCAGGATCGCGCGGAGCCCTCTGGGGCGCACTTCATGGCCTGGCTGCGT
CAGAGCGTCCAGACGCGCAAGCTCATCATCAACGACGCCAAGGCCCTGGTGCATACCGTCGCCGGTACGACCTACCTCGT
CAGCCCCGGCGTGTTCCAGCGCTACGCGCAGGAGTACCTTCAAGTCGCCGCCCTGGCCAAGCAGGAGAAGCTGGAGGGGT
GGCAGTGGGTGCAGAAGCGCTTCGAGAAGCTGGGACAGCACCGCAAGCAGCCGAGCGGGCTGAACATCTGGACCTGCGAA
GTTACGGGGCCGCGCAAGTCGCGCCGGCTGCACGGCTACCTGCTCGTCAGCCCGGATGCGCTGTTCCAGGAGACGCCGCC
AGACAACCCATACCTGCGGCTCGTCAACGAGGCCGCAAAGCGCGAAGATTCAGCCCTTGGGGGCAAGGACGACGATCAGG
CGTAG

Protein sequence :
MLSLFQRKRVPPTAGTPPTSAIETPKGSMRPESAASLLATPRRQKLLEHIWQRTSLSRRQFATLYLAPLERYAELVQQFP
ASESHHHAYPGGMLDHGLEIVAYALKLRQSYLLPAGVTPEAQAAQAEAWTAGTAYAALLHDIGKIAVDLHVEHADGSVWH
PWHGPLRKPYRFRYRKEREYRLHSAATGLLYARLLDRDIFDWLSGYPDLWAALLYVLAGQYEHAGTLGELVVQADQASVA
QELGGDPSKALAAPKHALQRKLLDGLRYLLKEEFKLNQAGPADGWLTQDALWLVSKTVSDKLRAHLLSQGIDGIPASNTA
VFNVLQDHGIVQPTPDGKAIWKATITSDAGWSHAFTFLKLSPAMIWDAADRPAPFAGCVQVEEEQAEPQAPAVADGPRVE
GTEAAPASAAPIASAAMDTGVAALLDLLGDTAPPATPEIPSSPVAEPEPAPSTMPRPQMSLAPSQDRAEPSGAHFMAWLR
QSVQTRKLIINDAKALVHTVAGTTYLVSPGVFQRYAQEYLQVAALAKQEKLEGWQWVQKRFEKLGQHRKQPSGLNIWTCE
VTGPRKSRRLHGYLLVSPDALFQETPPDNPYLRLVNEAAKREDSALGGKDDDQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG44 AAN62266.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 0.0 69
ORF C36 AAN62129.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 1e-179 68