Gene Information

Name : Alide2_1808 (Alide2_1808)
Accession : YP_004387710.1
Strain : Alicycliphilus denitrificans K601
Genome accession: NC_015422
Putative virulence/resistance : Unknown
Product : integrating conjugative element protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1910083 - 1911027 bp
Length : 945 bp
Strand : +
Note : KEGG: eba:ebA2511 hypothetical protein; TIGRFAM: Integrating conjugative element protein, PFL4710; PFAM: Integrating conjugative element protein, PFL4710

DNA sequence :
ATGAGCCTCCTGCTGGCATCCCGGCGCCTGCGCGCCACCGTCGCCTCGCTGCTGCTGAGCACGGCCACGTCGACGTTCGC
CCTGGACACCGCCACCATCGTCTCGTCGGCGCTGTCCCCCGACTGCCTCGAATACCGCGTGGTCGGTATCTGCTACTGGC
TGTACTGCACGCCCTTCGGCTGCTCGGTTCGCACTTCCGTCAAGGTGCGCCACTACGTCCCCGATGCGGTGGTGTCGAGC
TACTCGAACACTGGCGAAAACCCGTGGCTGGAGGTCAGGGCGATGAGCATGCCCAACCCGACCGCCAAGGCTGGCGGTGA
CGGCACGACCAATCACGACAACGAGAACAACCTCGCCAAGTTCAAGAACGCCGATGTCATCGGCCATCCGGCCGCGCTGG
TGTTCAGCCAGTTCGCCAGCGCCTCCGGCTACACCTGCGAAGGCGCTGGCACGGCCTTCATGCCGTATCTGCTGAGCACG
CTCGACACGATCGCCTGGCGCTACAACATCCCGGAAGCGTTCTACCCCGAAGCGCTCATCCCCGGCCGGCGCGAAATCGG
TACGCGCACCGGCCTGAACCTCTGGGGCAACGTGTATCCCCGCGGTGGCTTCCTGCACCAGACCGACGACCACAAGAGCG
GCGCCGTGGTCGCGCAGCGCGCGGGCGACATCGTGACGCGCCGCAACCAGATTCACGTGTATCAGCCCCTGCTGGCCAAC
GCCCGCGACGGCTACTGGCCGGCCGGCGCGCTGATGGAGACCGACGCCTCGACGGGCAAGTGGCAGGAGCTGACGCCCAC
GCTCTCGAACAGTTGCGTGGTCTTCCCGCACAGCCGCACCCGCGTGCAGGCCCAGCAGGGCGACTACGCCTGGGCCTTGT
GGCGGCCGTACTCCTGCTGCCGGCGCCGTGGCCAGGTCTTCCTCGGCAGCGTCGATTTCATGTGA

Protein sequence :
MSLLLASRRLRATVASLLLSTATSTFALDTATIVSSALSPDCLEYRVVGICYWLYCTPFGCSVRTSVKVRHYVPDAVVSS
YSNTGENPWLEVRAMSMPNPTAKAGGDGTTNHDNENNLAKFKNADVIGHPAALVFSQFASASGYTCEGAGTAFMPYLLST
LDTIAWRYNIPEAFYPEALIPGRREIGTRTGLNLWGNVYPRGGFLHQTDDHKSGAVVAQRAGDIVTRRNQIHVYQPLLAN
ARDGYWPAGALMETDASTGKWQELTPTLSNSCVVFPHSRTRVQAQQGDYAWALWRPYSCCRRRGQVFLGSVDFM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C43 AAN62136.1 hypothetical protein Not tested PAGI-2(C) Protein 5e-116 87
ORF SG51 AAN62273.1 hypothetical protein Not tested PAGI-3(SG) Protein 4e-111 83
pph89 CAI36130.1 hypothetical protein Not tested PPHGI-1 Protein 2e-105 72
EXA20 ABD94629.1 conserved hypothetical protein Not tested ExoU island A Protein 6e-95 68
unnamed ABR13357.1 hypothetical protein Not tested PAGI-5 Protein 5e-95 68
RL017 AAP84144.1 conserved hypothetical protein Not tested PAPI-1 Protein 3e-93 67
Pmu_02990 YP_005176198.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 2e-65 52
STY4576 NP_458661.1 hypothetical protein Not tested SPI-7 Protein 2e-75 51
t4273 NP_807871.1 hypothetical protein Not tested SPI-7 Protein 2e-75 51
PMI2573 YP_002152292.1 hypothetical protein Not tested Not named Protein 1e-62 49
YpsIP31758_3701 YP_001402655.1 hypothetical protein Not tested YAPI Protein 1e-71 49
api54 CAF28528.1 conserved hypothetical protein Not tested YAPI Protein 2e-71 49
unnamed AAX39458.1 unknown Not tested Hrp PAI Protein 9e-57 48
YE3467 YP_001007628.1 hypothetical protein Not tested YAPI Protein 6e-67 48