Gene Information

Name : Alide2_1800 (Alide2_1800)
Accession : YP_004387702.1
Strain : Alicycliphilus denitrificans K601
Genome accession: NC_015422
Putative virulence/resistance : Unknown
Product : conjugative transfer region lipoprotein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1900403 - 1900837 bp
Length : 435 bp
Strand : +
Note : TIGRFAM: Conjugative transfer region lipoprotein; KEGG: mpt:Mpe_A2393 hypothetical protein

DNA sequence :
ATGCCTCGGACCTGGATTGACGCGGCCGCCGTGCTGCTGGCGGCCACCCTGCTCGGCGGCTGCGCCACCAGCAAGGAGAA
GCTGCTGCCGCACGGCGACAGCACCATGCTCGACATCTGGCATCAGGAGACCGGCGGCAGCGCGGGCGGCGGCCAGGCCG
CGCGGCAACTGCTCGATGCGCGCCAGGGCCTGCGCCGGCCGCTGACCGAGGCCGATGTGCAGGCGGCGCCCGGCGTGCAG
GCGCGCTATACCCGTACCGCGCAGAACGAGATTCACCGCCAGTTCCACCGCCTGCCGAACCCCGACCTGGTGATGTACGT
GTTCCCGCACCTGGCGGGCACCGACCCGGTGCCGGTGCCCGGCTACAGCACGGTGTTCCCGCTCTACCAGCGCGTGCAGT
ACGCGATGCCGGGCGAGCGCGTGGAGGACTACTGA

Protein sequence :
MPRTWIDAAAVLLAATLLGGCATSKEKLLPHGDSTMLDIWHQETGGSAGGGQAARQLLDARQGLRRPLTEADVQAAPGVQ
ARYTRTAQNEIHRQFHRLPNPDLVMYVFPHLAGTDPVPVPGYSTVFPLYQRVQYAMPGERVEDY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C48 AAN62142.1 hypothetical protein Not tested PAGI-2(C) Protein 1e-41 79
ORF SG58 AAN62280.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-40 75
pph83 CAI36124.1 signal recognition particle GTPase Not tested PPHGI-1 Protein 8e-35 72
unnamed ABR13363.1 hypothetical protein Not tested PAGI-5 Protein 3e-34 69
EXA34 ABD94643.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-35 69
RL023 AAP84150.1 conserved hypothetical protein Not tested PAPI-1 Protein 4e-35 67
PMI2577 YP_002152296.1 lipoprotein Not tested Not named Protein 1e-26 53
Pmu_03080 YP_005176207.1 conjugative transfer region lipoprotein Not tested ICEPmu1 Protein 6e-18 48
YpsIP31758_3706 YP_001402660.1 lipoprotein Not tested YAPI Protein 3e-21 47
YE3483 YP_001007642.1 putative lipoprotein Not tested YAPI Protein 1e-20 47
api38 CAF28512.1 putative lipoprotein Not tested YAPI Protein 9e-22 47
STY4571 NP_458656.1 putative lipoprotein Not tested SPI-7 Protein 1e-25 47
t4267 NP_807866.1 lipoprotein Not tested SPI-7 Protein 1e-25 47