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Name : Alide2_1769 (Alide2_1769) Accession : YP_004387672.1 Strain : Alicycliphilus denitrificans K601 Genome accession: NC_015422 Putative virulence/resistance : Virulence Product : winged helix family two component transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 1866286 - 1866969 bp Length : 684 bp Strand : + Note : KEGG: gbm:Gbem_2672 winged-helix transcriptional response regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal DNA sequence : ATGCGCATCCTGATCATCGAAGACCAGTCGAAAGTCGCCCAGTCCGTCAAGCACGGGCTGGAGGCCGAGCGCTTCGACGT GACGGTGGCGGCCACCGGGGAGGACGGCTTCTTTCTCGTCTCGTCGCAGGTGTTCGACCTGCTCATCCTCGATCTCATGC TGCCCGGCCGCGACGGCCTGGAGATCCTGCGCACCTTGCGCAGCCGGGGGCTGGCCACGCCGGTGATCATCCTCTCGGCG CGGGACACGGTGGGGGACCGCATCCGCGGCCTTGACCTCGGTGCCGACGACTACCTCGTCAAGCCCTTCGCCTTCGAGGA GCTGCTGGCACGCATCCGGGCGCTGCTGCGGCGCGGGCGGGCCCAGGACGTGCTGCGCCTCAAAGTGGCGGACCTGGAGG TGGACCGGGTCACGCGCCGGGTGGCGCGCGGCGGGCAGGACGTGGAACTCACCGCGCACGAATACGAACTGCTCGACTAT CTGCTGCTGCACCAGGGCCGCGTGGTGTCGCGCGAGATGCTCGCGCGCGACGTCTGGCGCGAAGTGGCGCGCGCCACGCC GCTCGACAATGTCATCGACGTGCACATCGCCCGGCTGCGGCGCAAGATCGACAATGGTCACGGACATCCGCTGATCCACA CGGTGCGCGGGGTCGGTTTCGTGCTTCAGGAGCAGGCGCCGTGA Protein sequence : MRILIIEDQSKVAQSVKHGLEAERFDVTVAATGEDGFFLVSSQVFDLLILDLMLPGRDGLEILRTLRSRGLATPVIILSA RDTVGDRIRGLDLGADDYLVKPFAFEELLARIRALLRRGRAQDVLRLKVADLEVDRVTRRVARGGQDVELTAHEYELLDY LLLHQGRVVSREMLARDVWREVARATPLDNVIDVHIARLRRKIDNGHGHPLIHTVRGVGFVLQEQAP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 1e-32 | 41 |
| copR | AAC33719.1 | regulatory protein CopR | Not tested | SPI-5 | Protein | 1e-31 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Alide2_1769 | YP_004387672.1 | winged helix family two component transcriptional regulator | BAC0125 | Protein | 7e-38 | 48 |
| Alide2_1769 | YP_004387672.1 | winged helix family two component transcriptional regulator | BAC0083 | Protein | 4e-35 | 48 |
| Alide2_1769 | YP_004387672.1 | winged helix family two component transcriptional regulator | BAC0347 | Protein | 3e-33 | 47 |
| Alide2_1769 | YP_004387672.1 | winged helix family two component transcriptional regulator | BAC0111 | Protein | 4e-34 | 47 |
| Alide2_1769 | YP_004387672.1 | winged helix family two component transcriptional regulator | BAC0197 | Protein | 3e-34 | 46 |
| Alide2_1769 | YP_004387672.1 | winged helix family two component transcriptional regulator | BAC0308 | Protein | 3e-32 | 46 |
| Alide2_1769 | YP_004387672.1 | winged helix family two component transcriptional regulator | BAC0638 | Protein | 2e-34 | 44 |
| Alide2_1769 | YP_004387672.1 | winged helix family two component transcriptional regulator | NC_003923.1003417.p0 | Protein | 6e-25 | 42 |
| Alide2_1769 | YP_004387672.1 | winged helix family two component transcriptional regulator | NC_013450.8614146.p0 | Protein | 6e-25 | 42 |
| Alide2_1769 | YP_004387672.1 | winged helix family two component transcriptional regulator | NC_002951.3238224.p0 | Protein | 6e-25 | 42 |
| Alide2_1769 | YP_004387672.1 | winged helix family two component transcriptional regulator | NC_007793.3914065.p0 | Protein | 6e-25 | 42 |
| Alide2_1769 | YP_004387672.1 | winged helix family two component transcriptional regulator | NC_002758.1121390.p0 | Protein | 6e-25 | 42 |
| Alide2_1769 | YP_004387672.1 | winged helix family two component transcriptional regulator | NC_010079.5776364.p0 | Protein | 6e-25 | 42 |
| Alide2_1769 | YP_004387672.1 | winged helix family two component transcriptional regulator | NC_002952.2859858.p0 | Protein | 6e-25 | 42 |
| Alide2_1769 | YP_004387672.1 | winged helix family two component transcriptional regulator | NC_007622.3794948.p0 | Protein | 6e-25 | 42 |
| Alide2_1769 | YP_004387672.1 | winged helix family two component transcriptional regulator | AE015929.1.gene1106. | Protein | 8e-20 | 41 |
| Alide2_1769 | YP_004387672.1 | winged helix family two component transcriptional regulator | CP000675.2.gene1535. | Protein | 3e-22 | 41 |
| Alide2_1769 | YP_004387672.1 | winged helix family two component transcriptional regulator | CP000034.1.gene3834. | Protein | 2e-18 | 41 |
| Alide2_1769 | YP_004387672.1 | winged helix family two component transcriptional regulator | NC_002695.1.915041.p | Protein | 2e-18 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Alide2_1769 | YP_004387672.1 | winged helix family two component transcriptional regulator | VFG1390 | Protein | 3e-30 | 44 |
| Alide2_1769 | YP_004387672.1 | winged helix family two component transcriptional regulator | VFG1389 | Protein | 2e-21 | 43 |
| Alide2_1769 | YP_004387672.1 | winged helix family two component transcriptional regulator | VFG0473 | Protein | 8e-25 | 42 |
| Alide2_1769 | YP_004387672.1 | winged helix family two component transcriptional regulator | VFG0596 | Protein | 5e-33 | 41 |
