Gene Information

Name : Alide2_1737 (Alide2_1737)
Accession : YP_004387641.1
Strain : Alicycliphilus denitrificans K601
Genome accession: NC_015422
Putative virulence/resistance : Virulence
Product : phage transcriptional regulator AlpA
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 1838013 - 1838231 bp
Length : 219 bp
Strand : +
Note : PFAM: Prophage CP4-57 regulatory; KEGG: tmz:Tmz1t_1000 phage transcriptional regulator, AlpA

DNA sequence :
ATGTCTTCGCAGACCATCGCGCCGGCCTTGCCGCCCGAGCACCGCATCCTGCGCCGCGCCGAGGTCGAAGCCAAGACCGG
CTTCAAGCGCGCGCACATCTACAGCCTCATGAAGGAAGGCAAGTTCCCCAAGGCGCTGCGCCTGGGCGTGCGCGCGGTGG
GCTGGGACTCGGTGGAGATCGAACAGTGGATCGCCGATCGCCTCAAAGAACGCGCCTGA

Protein sequence :
MSSQTIAPALPPEHRILRRAEVEAKTGFKRAHIYSLMKEGKFPKALRLGVRAVGWDSVEIEQWIADRLKERA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 3e-24 74
ORF C109 AAN62202.1 phage-related protein Not tested PAGI-2(C) Protein 4e-21 69
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 8e-08 46
unnamed CAA21398.1 - Not tested HPI Protein 1e-10 44
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 9e-11 44
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 3e-09 43
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 4e-08 41
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 4e-08 41
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 3e-08 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Alide2_1737 YP_004387641.1 phage transcriptional regulator AlpA VFG1118 Protein 1e-08 41