Gene Information

Name : Alide2_1717 (Alide2_1717)
Accession : YP_004387623.1
Strain : Alicycliphilus denitrificans K601
Genome accession: NC_015422
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 1817975 - 1818871 bp
Length : 897 bp
Strand : -
Note : KEGG: tmz:Tmz1t_1027 transcriptional regulator, LysR family; manually curated; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR

DNA sequence :
TTGGAGCCTAGATTGCTACGCTATTTCGTTGCAGTCGCGGAAGAGCTGCATCTCGCCCGCGCGGCCGAGCGTCTCGGGAT
CGAGCAATCTCCCGTATCACGAGCAATGCGCGACCTGGAAAGCCAGCTTGGCGTGCAGTTGTTCGACCGCAGCACCCGCC
TGACGCGGCTGACCTGGGCCGGCCAGGTGTTCCTAGGCGAATGCCGACGCGTGATGGCCACCGTGGAGCAGGCAGTCAAG
AGTGCCAAGGCGGCGGCACAGGGCTACCAGGGCCATCTGCGCATCGCGATCTGCGACGGCCTGGCGCAGCCCCGCATCGC
CACCTTGCTGGCACGCAGCCGCGAGGAGGAGCCCGAGATGGAGATTCGCGTCTTCGAGCTGCCGTTCGCGCAGCAGCTCA
AGACGCTGCACGACGATCTGCTGGACATCGGCTTTGCGTTGTCAAACGCGGTACATGATGGCCTCGTCGCCGAGCCGGTG
TGGACCGATCCGCTGTCGGTGATCGTGCCCGCACGCCACCCCTTGCTGGCACACGTGCAGGTGCCGCTGGCCGAAGCCCT
GAAGTTCCCGCTGGTTCTGTGCCATCCCGAATCGGGATCGGGCTGCCGCCATCAGATTCAAGCGCTGCTGCAGGACGCAG
GCACGCCGCTCAAGCTGGTCGATGAAGTGACCAGCCTGGGCGTGATGCTGACCCTGGTCGGTGCCGGCTACGGCATCGGC
TTCGCCATCGCCTCGCAGGTGCAGACGCTACAGCGCCCGGACATCTCCATTCGTCCCTTGGCCGGCAGCCCACCGGTGCT
CTCTACCTACCTGCTGCGCCGCCGGGGCGAACCCTCGGAGCCCATGAAGCGGTTCATCGAGCGGGCGAAAGGCGGGCGGG
ACCGCGCCTGTCGATGA

Protein sequence :
MEPRLLRYFVAVAEELHLARAAERLGIEQSPVSRAMRDLESQLGVQLFDRSTRLTRLTWAGQVFLGECRRVMATVEQAVK
SAKAAAQGYQGHLRIAICDGLAQPRIATLLARSREEEPEMEIRVFELPFAQQLKTLHDDLLDIGFALSNAVHDGLVAEPV
WTDPLSVIVPARHPLLAHVQVPLAEALKFPLVLCHPESGSGCRHQIQALLQDAGTPLKLVDEVTSLGVMLTLVGAGYGIG
FAIASQVQTLQRPDISIRPLAGSPPVLSTYLLRRRGEPSEPMKRFIERAKGGRDRACR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
bphR AAN62138.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 1e-59 54
bphR AAN62326.1 putative transcriptional regulator Not tested PAGI-3(SG) Protein 4e-48 44