Gene Information

Name : Alide2_1606 (Alide2_1606)
Accession : YP_004387514.1
Strain : Alicycliphilus denitrificans K601
Genome accession: NC_015422
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1698465 - 1699289 bp
Length : 825 bp
Strand : -
Note : PFAM: Protein of unknown function DUF932; KEGG: ajs:Ajs_2639 hypothetical protein

DNA sequence :
ATGCAAATCGCATCCCGCTTCGCTTCCCGTTCCCCGGTGCTGCGTTCGGAACGTCCCTTGTCGGATGACCAAATCCGGGC
CGTGGCCCCGTCCATCTTCGCGGAGGCACCGCACGAAAGCCGCTCCGAGCGGTACAGCTACATCCCCACCGCAACCGTGC
TGCAAGAACTGCGCGGGGAAGGCTTCGAGCCCTTCATGGTGACGCAAACCCGCGTGCGCCACGACGACCGCCGCGACTAC
ACCAAGCACATGATCCGGCTGCGCCATGCCAGCCAGATCAACGGACGCGAGGCCAACGAAATCATCCTGCTGAACTCCCA
TGACGGCACCAGCAGCTATCAGATGCTGGCCGGGATGTTTCGCTTCGTTTGCAGCAATGGCCTTGTCTGCGGCGACACCG
TGGCCGACGTGCGCGTGCCGCACAAGGGCGACGTAGCAGCCCACGTCATCGAAGGCGCTTACGAAGTCCTGCACGGCTTC
GACCGGGCGCAGGAATCGCGCGATGCCATGCGCGCCATCACGCTGGACGCCGGGGAATCGGAAGTGTTCGCCCGTGCTGC
GCTGGCGTTGAAGTACGACGAGGACAAGCCCGCGCCCATCACGGAATCGCAAATCCTGATGCCGCGCCGCCACGACGACG
ACCGCCGCGACCTGTGGAGCGTGTTCAACCGCACGCAGGAGAACTTGACCAAAGGCGGCCTGTCCGCCCGCGCAGCGAAT
GGCCGCCGCCAGACCACCCGGCCCGTGCAGGGCATCGACCAAAGCGTGCGCCTGAATCGCGCCCTGTGGCTGCTGGCCGA
TGGCCTGCGCCAGTTGAAAGCCTGA

Protein sequence :
MQIASRFASRSPVLRSERPLSDDQIRAVAPSIFAEAPHESRSERYSYIPTATVLQELRGEGFEPFMVTQTRVRHDDRRDY
TKHMIRLRHASQINGREANEIILLNSHDGTSSYQMLAGMFRFVCSNGLVCGDTVADVRVPHKGDVAAHVIEGAYEVLHGF
DRAQESRDAMRAITLDAGESEVFARAALALKYDEDKPAPITESQILMPRRHDDDRRDLWSVFNRTQENLTKGGLSARAAN
GRRQTTRPVQGIDQSVRLNRALWLLADGLRQLKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 2e-109 80
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 6e-107 77
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 2e-72 54
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 6e-72 54
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 3e-73 54
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 5e-75 54
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 9e-72 53
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-71 53
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 9e-72 53
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 1e-71 53
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 9e-72 53
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 1e-71 53
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 8e-73 53
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 8e-73 53
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 9e-71 53
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-71 53
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-71 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Alide2_1606 YP_004387514.1 hypothetical protein VFG1526 Protein 2e-73 54
Alide2_1606 YP_004387514.1 hypothetical protein VFG1615 Protein 1e-72 54
Alide2_1606 YP_004387514.1 hypothetical protein VFG0658 Protein 4e-72 53
Alide2_1606 YP_004387514.1 hypothetical protein VFG1676 Protein 5e-71 53