Gene Information

Name : Alide2_1194 (Alide2_1194)
Accession : YP_004387114.1
Strain : Alicycliphilus denitrificans K601
Genome accession: NC_015422
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG1985
EC number : 1.1.1.193
Position : 1244601 - 1245713 bp
Length : 1113 bp
Strand : -
Note : TIGRFAM: Riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase, C-terminal; KEGG: dia:Dtpsy_2542 riboflavin biosynthesis protein RibD; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; CMP/dCMP deaminase, zinc-binding

DNA sequence :
ATGACAGACGCTGCCCCCTTCATCACCCAAGCGCTTGGGCTCGCCGCCCAGGCGCTTTTTCTTTCCAACCCCAATCCGCG
CGTCGGCTGCGTCATTGCCAGCGGCGCCGGCGCTGTGCTGGGCCAGGGCTTCACCCAGCAGGCCGGCGGCCCGCATGCCG
AGGTGGTGGCACTGCGCGACGCGGCGGCCAGCGGCAATGACGTGCGCGGCGCGACGGCCTACGTGACGCTGGAGCCCTGC
GCGCACCAGGGGCGCACAGGGCCGTGCTGCGACGCGCTGATCCAGGCCGGCATCGGGCGCGTGGTGGCCTCCATCGAGGA
CCCGAATCCCTTGGTAGGCGGGCAGGGCTTCGCGCGGCTGCGGGCGGCGGGCATCGACGTGCAGGTGGGGCCGGGCGCGC
AGCAGTCGCGCGAGCTCAACATCGGCTTCTTCAGCCGCATGGTGCGCGGCATGCCCTGGGTGCGCATGAAGGCCGCGGCC
TCGCTCGACGGCGTGACGGCGCTGGCCAATGGCACCAGCCAGTGGATCACCGCGCCCGCCGCGCGCGCGGACGGCCATGC
CTGGCGCGCGCGCGCCTGCGCGGTGCTGACCGGCATCGGCACGGTGCTGGAGGACGACCCGCTTCTGAACGTGCGCGAGG
TGGCCACGCCGCGCCAGCCGCACCTGGTGGTCGTGGACAGCCGGCTGCAGACGCCGCTCGGCGCGCGCCTGTTCGACGTG
CCTGGGCGGCGCGTTTTCATCTACGCCGCCGACGGCCACCCTGACCGGGCGCAGGCGCTGCGGGCGCGCGGCGCCACGGT
CATCGTGCTGCCCAATGCGCGCGGCAAGGTGGACCTGCCCGCCATGCTGCGCGACCTGGGCGCGAACGGCGTGAACGAAC
TGCACTTGGAGGCGGGCCACAAGCTCAACGGCTCGTTCCTGCGCGAGGGGCTGGTCGATGAGCTGCTGCTGTACCTGGCG
CCCTTGCTGCTGGGCAGCGGCGCGCATGGGCTGGCGAGCTGGGGGCCGCTGCAGGCCCTGGCCGATGGCGTGCGCATGGA
GTTCCACGGCATGCAGCAGCTGGGCCCGGACCTGCGGCTGATCGCCCGCGTGGCGGGACGGGCCGATTTCTGA

Protein sequence :
MTDAAPFITQALGLAAQALFLSNPNPRVGCVIASGAGAVLGQGFTQQAGGPHAEVVALRDAAASGNDVRGATAYVTLEPC
AHQGRTGPCCDALIQAGIGRVVASIEDPNPLVGGQGFARLRAAGIDVQVGPGAQQSRELNIGFFSRMVRGMPWVRMKAAA
SLDGVTALANGTSQWITAPAARADGHAWRARACAVLTGIGTVLEDDPLLNVREVATPRQPHLVVVDSRLQTPLGARLFDV
PGRRVFIYAADGHPDRAQALRARGATVIVLPNARGKVDLPAMLRDLGANGVNELHLEAGHKLNGSFLREGLVDELLLYLA
PLLLGSGAHGLASWGPLQALADGVRMEFHGMQQLGPDLRLIARVAGRADF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 1e-43 43
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 1e-43 43