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Name : Alide2_1075 (Alide2_1075) Accession : YP_004386998.1 Strain : Alicycliphilus denitrificans K601 Genome accession: NC_015422 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1120112 - 1121428 bp Length : 1317 bp Strand : + Note : PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Seryl-tRNA synthetase, class IIa, N-terminal; TIGRFAM: Seryl-tRNA synthetase, class IIa; HAMAP: Seryl-tRNA synthetase, class IIa; KEGG: dia:Dtpsy_2772 seryl-tRNA synthetase DNA sequence : ATGCTCGACATCCTCCTCCTTCGCAAAGACCTCGCATCGGCCGTCGCCCGGCTGGAAACCCGCAAGAAGCCCCAGGCCTT CCTGAACGTGGAGGCGTTCCAGGCCCTCGAATCCGAGCGCAAGACCATACAGACGCGCACCGAGGAGCTGCAGTCCCGGC GCAACCAGCTGTCCAAGCAGATCGGCCAGCTCATGGGCAAGGGCGAGAAGGACGCGGCCGAGGCCGCCAAGGCCCAGGTT GCCACGATCAAGGAGGAGCTCGACGGCTCCGCCGCGCGCTTGGAGCAGATCCAGTCCGAGCTGCAGGCCATGCTCGCCGC CGTGCCCAACCTGCCGCACGAGAGCGTGCCCGTGGGCAGCGACGAGGCCGGCAACGTCGAGGTGCGCCGCTGGGGCACGC CCCGCGACTTCAGCTTCGCCGTGAAGGACCACGTGGACCTGGGCGCGCCGCTGGGCCTGGATTTCGACATGGGCGCGAAG CTCTCGGGCTCGCGCTTCACTGTGATGAAGGGCCCCATCGCCCGCCTGCACCGCGCACTTGCGCAATTCATGCTGGACGT GCAGACCGGCGAGCACGGCTACACCGAGTGCTACGTGCCCTACATCGTCAATGCCGATTCGCTGCGGGGCACGGGCCAGC TGCCGAAGTTCGAGGGCGACCTGTTCGCAGCCAAGAAGGGCGGCCAGGAGGGCGAGCCTGTGCCCGACGATGCCCAGCTC TACCTCATCCCCACCAGCGAGGTGCCGCTCACCAACATCGTGCGCGACGAGGTGCTGGCCGAGAGCGACCTGCCCATCAG GCTCACGGCGCATTCGCCGTGTTTTCGCTCCGAGGCCGGCAGCTACGGCCGCGACACGCGCGGCATGATCCGCCAGCACC AATTCGACAAGATCGAGATGGTGCAGATCGTGCACCCCGACAAGAGCTACGAGGCGCTCGAAGAGATGACGCGCCATGCC GAGGCCATCCTGCAGAAGCTGGGTCTGCCCTACCGTGTGGTGAGCCTGTGCACGGGTGACATGGGCTTCGGCAGCGCCAA GACTTATGACCTGGAGGTCTGGCTGCCCGCGCAGGGCACCTACCGGGAGATCAGCTCGGTATCCAACTGCGAGGCCTTCC AGGCGCGCCGCATGCAGGCGCGCTTCAAGAACGCGCAGGGCAGGAACGAGCTGGTGCATACGCTCAACGGCTCGGGCCTG GCCGTGGGCCGCACGCTGGTGGCGGTGCTGGAGAACTGCCAGCAGGCCGACGGCAGCATCGCCATTCCCGAGGTTTTGCG CCCCTACATGGGCGGGCTGGAGCGGCTCGCGGCCTAA Protein sequence : MLDILLLRKDLASAVARLETRKKPQAFLNVEAFQALESERKTIQTRTEELQSRRNQLSKQIGQLMGKGEKDAAEAAKAQV ATIKEELDGSAARLEQIQSELQAMLAAVPNLPHESVPVGSDEAGNVEVRRWGTPRDFSFAVKDHVDLGAPLGLDFDMGAK LSGSRFTVMKGPIARLHRALAQFMLDVQTGEHGYTECYVPYIVNADSLRGTGQLPKFEGDLFAAKKGGQEGEPVPDDAQL YLIPTSEVPLTNIVRDEVLAESDLPIRLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKIEMVQIVHPDKSYEALEEMTRHA EAILQKLGLPYRVVSLCTGDMGFGSAKTYDLEVWLPAQGTYREISSVSNCEAFQARRMQARFKNAQGRNELVHTLNGSGL AVGRTLVAVLENCQQADGSIAIPEVLRPYMGGLERLAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-102 | 54 |
