|
Name : Lbuc_2375 (Lbuc_2375) Accession : YP_004385902.1 Strain : Genome accession: NC_015420 Putative virulence/resistance : Resistance Product : arsenical pump membrane protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1055 EC number : - Position : 6148 - 7443 bp Length : 1296 bp Strand : + Note : KEGG: lpl:pWCFS103_13 arsenical pump membrane protein; TIGRFAM: Arsenical pump membrane protein; PFAM: Arsenical pump membrane protein DNA sequence : ATGCAAGTCTTTTTTGCCGTTGGAATTTTCTTACTCACATTATTATTCGTTATCTGGCAACCTAGAGGATTATCAATTGG ATGGACAGCCATTGGTGGTGCAATTTTAGCATTATTGTTTGGCGTGGTGAGTTTTAAAGATGTTGGAACAGTTACCGGAA TTGTCTGGAATGCCACCTTATCTTTCGTGGCTATTATTCTGATTTCACTCATTTTAGATCAAATCGGATTTTTTGAATGG GCCGCCTTACACATGGCTCGCTGGGCAAACGGTCACGGTATTCGCATGTTTATTTTGGTGACCACCTTAGGCGCCGTCGT TGCTGCCCTTTTTGCTAATGATGGGGCTGCTCTGATTCTTACCCCCATTGTTTTAGCAATGGTTCGTGCCTTACACTTTG ATGAAAAGCAAGTTTTCCCTTTTATTATTGCCAGTGGCTTTATTGCCGATACCACTTCTTTACCAATGATTGTTAGTAAC TTGGTAAATATTGTCTCTGCAGACTTTTTTGGAATTTCCTTTTCAGCGTATGCGTTAAGAATGTGGATTCCTGATCTATT TTCGCTGTTAGGTAGTATTGGTATCCTGTATCTTTACTTTCGAAAAGCATTGCCACGAAAATTTGATGCCACTCAGGTTG CGGAACCCAGTTCTGCACTAAAAGATCAGCGACTTTTCAAGTTTTCATGGGTCGTCTTAATCCTCCTATTGATTGGTTAC TTTAGTAGCGGTTTCTTAGGAATCCCCGTCTCCTTTATCGCACTGAGTATTGCGGCTATTTTTCTGATAGTTGGTCAAAG AAGTTCCCATGTTAATGCGATGGCAGCGATTAAAGGAGCTCCTTGGAACATTGTCTTTTTCTCAATCGGTATGTATGTCG TAGTCTACGGCCTTCAGAACGTTGGTCTAACAACATTATTATCAGGTGTCATTACCGAAATCGCAAAAGGTGGTCGGTTT GCTGCCACAATGGGCATGGGCTACTTAGCAGCACTTTTATCGTCATTAATGAATAACATGCCGACCGTCATGATTAATGC ACTATCAATCAAAGGCGCTGACGTTTCAGGGCTCATCCATCATACGTTAGTGTACGCAAACATAATCGGCTCAGATTTGG GACCTAAGATTACCCCAATTGGCTCTTTGGCTACATTAGTCTGGCTACATGTGTTAGCTCAAAAGGGAGTTAAAATTAAA TGGGGGACTTATTTTAAAATTGGAATTGTAACCACGATCCCAGTGTTGTTTATTACCCTATGTGGCCTCTGGTTATCATT ATCGATTTTTGGTTAG Protein sequence : MQVFFAVGIFLLTLLFVIWQPRGLSIGWTAIGGAILALLFGVVSFKDVGTVTGIVWNATLSFVAIILISLILDQIGFFEW AALHMARWANGHGIRMFILVTTLGAVVAALFANDGAALILTPIVLAMVRALHFDEKQVFPFIIASGFIADTTSLPMIVSN LVNIVSADFFGISFSAYALRMWIPDLFSLLGSIGILYLYFRKALPRKFDATQVAEPSSALKDQRLFKFSWVVLILLLIGY FSSGFLGIPVSFIALSIAAIFLIVGQRSSHVNAMAAIKGAPWNIVFFSIGMYVVVYGLQNVGLTTLLSGVITEIAKGGRF AATMGMGYLAALLSSLMNNMPTVMINALSIKGADVSGLIHHTLVYANIIGSDLGPKITPIGSLATLVWLHVLAQKGVKIK WGTYFKIGIVTTIPVLFITLCGLWLSLSIFG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 7e-130 | 66 |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 2e-126 | 66 |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 3e-129 | 66 |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 5e-105 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Lbuc_2375 | YP_004385902.1 | arsenical pump membrane protein | BAC0574 | Protein | 2e-127 | 66 |
| Lbuc_2375 | YP_004385902.1 | arsenical pump membrane protein | BAC0575 | Protein | 5e-128 | 65 |
| Lbuc_2375 | YP_004385902.1 | arsenical pump membrane protein | BAC0576 | Protein | 1e-105 | 57 |
| Lbuc_2375 | YP_004385902.1 | arsenical pump membrane protein | BAC0578 | Protein | 1e-105 | 57 |
| Lbuc_2375 | YP_004385902.1 | arsenical pump membrane protein | BAC0031 | Protein | 7e-102 | 56 |
| Lbuc_2375 | YP_004385902.1 | arsenical pump membrane protein | BAC0577 | Protein | 1e-105 | 56 |
