Gene Information

Name : Lbuc_2422 (Lbuc_2422)
Accession : YP_004385940.1
Strain :
Genome accession: NC_015420
Putative virulence/resistance : Virulence
Product : capsular exopolysaccharide family
Function : -
COG functional category : D : Cell cycle control, cell division, chromosome partitioning
COG ID : COG0489
EC number : 2.7.10.2
Position : 49895 - 50650 bp
Length : 756 bp
Strand : -
Note : KEGG: lfe:LAF_0086 exopolysaccharide biosynthesis protein; TIGRFAM: Exopolysaccharide synthesis protein

DNA sequence : 
ATGAATATTTTTCGTCGTAAACAGAAAAAAATTTCCACTGATACTTTAAGAAACGGTGTGAAGTTAATTACTGATGTTGA
TCCTAAAGATATTGTTTCTGAACAATTTCGTACAGTTAGGACAAATATTAATTTTTCAGCAGTTAATCAAAAATTAAAAA
CAATTATTTTTACTTCTTCGGCAGTTAGCGAGGGAAAATCAACTGTTTCCGCTAACTTGGCGGTCATTTGGGCTCAGCAA
GGGCAGAAGGTTCTATTTATTGATTCAGACTTGCGACGTCCAACTTTACATACGACATTTGGTTTATTAAATACCAATGG
CCTATCCACGGCTTTATCCACTGATATAGATTTCAATTCAGTAGTGCAAAAAACGGAGATTGATAATTTATCTGTGATCA
CTAGTGGTCCCATTCCACCTAATCCATCAGACCTGTTGGCTTCTAATCGGATGAAAGAATTAATTTCTTATTTTAAGAAA
ATCTATGATGTGATTATTTTAGATGTTCCGCCACTACTATCAGTTACTGATACGCAAATTATTGCAGCTCAGGCTGATGG
GGTAGTGCTGGTAGTGCGCCAAGGATTAGCACAAAAATTGGCTATAAAGCGCTCAATTGAGCTCTTAAAAATGGTTAAAG
CCAATTTATTAGGTTATGTATTAAATGACGTTGCACCTAAGAATGGGTACGGTTATGGCTACGGTTATGGCTATGGCTAT
GGATATGGGTACGGTTATGATAATGAGGGTAAATAG

Protein sequence : 
MNIFRRKQKKISTDTLRNGVKLITDVDPKDIVSEQFRTVRTNINFSAVNQKLKTIIFTSSAVSEGKSTVSANLAVIWAQQ
GQKVLFIDSDLRRPTLHTTFGLLNTNGLSTALSTDIDFNSVVQKTEIDNLSVITSGPIPPNPSDLLASNRMKELISYFKK
IYDVIILDVPPLLSVTDTQIIAAQADGVVLVVRQGLAQKLAIKRSIELLKMVKANLLGYVLNDVAPKNGYGYGYGYGYGY
GYGYGYDNEGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0061 YP_300151.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 4e-34 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lbuc_2422 YP_004385940.1 capsular exopolysaccharide family VFG1298 Protein 4e-34 43