Gene Information

Name : Lbuc_2393 (Lbuc_2393)
Accession : YP_004385914.1
Strain :
Genome accession: NC_015420
Putative virulence/resistance : Unknown
Product : Integrase catalytic region
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 22044 - 23033 bp
Length : 990 bp
Strand : -
Note : PFAM: Integrase, catalytic core; KEGG: ssp:SSP1423 transposase

DNA sequence :
ATGGATCACTACAAGCATATTACCATAGATGAACGGGAAACTATCTTTTTAATGAGGAATCATGGAAACTCACTTCGTGA
GATTGCCAGCCATATCAAGAAAAGTTACTCAACCATTTCTCGAGAATTAAGCCGTAATTCTACTGGTAAATCCTATTCAC
CTTCGAAGGCTCAGGAGAAGTACAAACAGCGCAAAGGCAACTGTGGCAGAGTCTCTCTCTTGAGTAATCCTCAGGTGTTT
GAAGTGGTGAGAGAACACTTCTGCGAAGACCTTTGGTCTCCGGAGGAAATATCGAATCGCTTGGCAGTCGAAAAGTATCC
GGTGCAGATCAGTACCACGACTATTTACCGTGGGATTTTCAATGGCTTATTTGATAATTTGTTTAAATCTGGCAGCTCTA
GTGCCGTGCGCCATCTAAGGCATCACGGCAAGTCTCGCCACAATAAAGCTTATCAAGAAAAGCGAGGCAAGATTCCAATC
CCAAACAAGATTCATGATCGTCCGCGAGAAGCTGACAACCGTGTAGAAATTGGTCACTGGGAAGGTGATACCGTGTTAGG
CAAAAGCGGAAAGGCTTGTGTCGTTACATTGGTTGATCGAAAATCTCGTTACCTGCTTATTGGTAAAGCTGCTAAAAGAA
CTTCAGAAGCAGTCACGGATACTTTGAGCGACTTAATGAAGCTATGGCCTGGTAGATCGTTAACGATTACCCCGGATAGG
GGTAAAGAGTTTGCCAAAGTTCAATGTTTAACTGATAAGTTTGGTACGCCCTTCTACTTTCCCGATCCTCACTCTCCTTG
GCAACGAGGAACTAACGAAAATACTAACGGCTTGCTTCGCGAATATTTGCCAAAAGGAACTGACCTTGATTCAATTACTG
ACCGCCGGATACAAGCATATGCAGAACAAATGAATAATCGTCCCCGTAAATGTCTCGGATGGAAAACGCCTTATGAAATA
TTCTTTAATGTCGTGTTGCACTTAATTTGA

Protein sequence :
MDHYKHITIDERETIFLMRNHGNSLREIASHIKKSYSTISRELSRNSTGKSYSPSKAQEKYKQRKGNCGRVSLLSNPQVF
EVVREHFCEDLWSPEEISNRLAVEKYPVQISTTTIYRGIFNGLFDNLFKSGSSSAVRHLRHHGKSRHNKAYQEKRGKIPI
PNKIHDRPREADNRVEIGHWEGDTVLGKSGKACVVTLVDRKSRYLLIGKAAKRTSEAVTDTLSDLMKLWPGRSLTITPDR
GKEFAKVQCLTDKFGTPFYFPDPHSPWQRGTNENTNGLLREYLPKGTDLDSITDRRIQAYAEQMNNRPRKCLGWKTPYEI
FFNVVLHLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Pmu_02710 YP_005176177.1 ISApl1 transposase Not tested ICEPmu1 Protein 5e-71 50
SAR0085 YP_039551.1 transposase Not tested Type-II SCCmec Protein 7e-51 42
unnamed BAC67550.1 putative transposase Not tested Type-IVc SCCmec Protein 5e-51 42