|
Name : CbC4_4104 (CbC4_4104) Accession : YP_004385679.1 Strain : Genome accession: NC_015417 Putative virulence/resistance : Unknown Product : IstB ATP binding domain-containing protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1484 EC number : - Position : 100542 - 101237 bp Length : 696 bp Strand : - Note : putative conserved domain identified by match to the P_loop NTPase superfamily DNA sequence : ATGATTAATCATTTAGACGAAGTCATTGATTTTTCTACTAAAAATAATTTATCCTTTGTTGATGCTCTTATTAAGCTTAC AGCTTATGAAATAGATTTTAAAGAAGCAAATATGATTAAATCTATGGTAAAAGTAGGCGCTTTTCCTCATAAAAAAGAGG TTAAAGACTTTGATTTCAGCTTTCAACCTAGCATTAATAAAGATCAGATATTAGATTTTTTAACATTACGCTTTCTAAAT ACACAAGAAAATATAGTTTTCCTAGGTCCTAGTGGAGTAGGAAAAACGCACCTTGCTACATCTATAGGAATTGCGGCAGC AAAACGTAGATATAGTACATACTTTATTAAATGTCATGATTTATTACAGCAATTAAAACGTGCAAATTTAGAGAATCGAT TAGATTCTAGACTTAAACATTTTAGTAAGTACAAGCTCCTAATAATAGATGAATTAGGCTATCTACCGATAAATAAAGAA GACTCTAAGTTATTCTTCCAACTCATTGACATGCGATATGAGAAAAAAAGTACAATTTTAACAACTAATATAAATTTCAA TGCTTGGGATGATATTTTTTATGATCCTATCATCGCAAATGCTATATTAGATAGAGTTTTGCACCATGCTCATGTTGTAC CTATTAATGGAAAGTCTTATCGCTTAAAAGATCACTTTAAAGATGACGATGAGTAA Protein sequence : MINHLDEVIDFSTKNNLSFVDALIKLTAYEIDFKEANMIKSMVKVGAFPHKKEVKDFDFSFQPSINKDQILDFLTLRFLN TQENIVFLGPSGVGKTHLATSIGIAAAKRRYSTYFIKCHDLLQQLKRANLENRLDSRLKHFSKYKLLIIDELGYLPINKE DSKLFFQLIDMRYEKKSTILTTNINFNAWDDIFYDPIIANAILDRVLHHAHVVPINGKSYRLKDHFKDDDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| y1093 | CAD66188.1 | transposase Orf B, insertion element IS100 | Not tested | PAI III 536 | Protein | 1e-38 | 47 |
| y1093 | CAD42087.1 | OrfB protein of IS100 transposase | Not tested | PAI II 536 | Protein | 8e-38 | 46 |
| YPTB1586 | YP_070114.1 | transposase/IS protein | Not tested | HPI | Protein | 1e-37 | 46 |
| orfB | CAE85183.1 | OrfB protein, transposase, IS100 | Not tested | PAI V 536 | Protein | 8e-38 | 46 |
| unnamed | CAA21402.1 | - | Not tested | HPI | Protein | 1e-37 | 46 |
| api84 | CAF28558.1 | putative transposase | Not tested | YAPI | Protein | 8e-38 | 46 |
| y1093 | CAC43411.1 | IS100 transposase; transposase ORFA | Not tested | PAI III 536 | Protein | 8e-38 | 46 |
| unnamed | CAB46598.1 | IS100 transposase | Not tested | HPI | Protein | 8e-38 | 46 |
| s0036 | CAD33774.1 | ORF B protein | Not tested | PAI I 536 | Protein | 8e-38 | 46 |
| YPO1901 | YP_002346891.1 | transposase/IS protein | Not tested | HPI | Protein | 1e-37 | 46 |
| y2410 | NP_669717.1 | transposase/IS protein | Not tested | HPI | Protein | 1e-37 | 46 |
| aec58 | AAW51741.1 | Aec58 | Not tested | AGI-3 | Protein | 8e-38 | 46 |
| y1094 | CAD33719.1 | ORF B protein | Not tested | PAI I 536 | Protein | 1e-35 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CbC4_4104 | YP_004385679.1 | IstB ATP binding domain-containing protein | VFG1663 | Protein | 8e-39 | 47 |
| CbC4_4104 | YP_004385679.1 | IstB ATP binding domain-containing protein | VFG1515 | Protein | 4e-38 | 46 |
| CbC4_4104 | YP_004385679.1 | IstB ATP binding domain-containing protein | VFG1627 | Protein | 4e-38 | 46 |
| CbC4_4104 | YP_004385679.1 | IstB ATP binding domain-containing protein | VFG1606 | Protein | 4e-38 | 46 |
| CbC4_4104 | YP_004385679.1 | IstB ATP binding domain-containing protein | VFG1460 | Protein | 6e-36 | 45 |
