|
Name : gabD (MCON_2755) Accession : YP_004384963.1 Strain : Methanosaeta concilii GP6 Genome accession: NC_015416 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 2345009 - 2346442 bp Length : 1434 bp Strand : - Note : - DNA sequence : ATGCATCAGACTCATATGATAATCGACGGGGAACAGCTCCCCATTTCATCCCATAAGGTGGAGACGATTTGCAATCCAGC AAACCAGGAGCCTGTGGCTCTGGTCTCCGTAGGAACTCGCCAGGATGCCCGGATGGCTTTGGAGGCGGCAAAGAAGGCAT TTCCTCTCTGGTCTGAGACCGCCTGCGAGAAGAGGGCAGAGCTATTGCATTCTGCCGCGGATCTGGTGCGAGAGAGGGCG AAGTCCATAGCCCGACTGCTGACTCAGGAGCAGGGAAAGCCCCTGAAAAATGCTCGAGCGGAGATCCTATCATCTGCTGG TATCCTGGACTATTATGCAGAAGAGGGCAGGAGGAACGTCGGGGAATGGCTGGCCACATCCCGTGGCCGGAGCGTTGTCC TCCGCCAGCCTGTGGGCGTCGCTGCCCTCATCACCCCCTGGAATTATCCGGTGGACCTTCTCTCCTGGAAGGTGGGGCCG TGCCTGGCTGCGGGCTGCACTTTTGTGGCCAAACCGCCCAGCCGCGCTCCCGTCGCCGCCACGGAATTCGTTCGGGCGAT CTATGACGCCGGTCTTCCTGCAGGAGTGGTCAATGTGGTACACGGTCCGGGTAGTGAGGTGGGAGCAGAGCTGGTGGAAA ACCCCATCTCCAGGAAGATCGCCTTCACCGGAGAGACAGAGACCGGACGATGGATAATGGCCCAGGCTGCCCTTCATATA AAACGCGTCTCACTGGAGCTGGGAGGGCAATCGCCCTTCATAGTCTGTGGCGATGCCGATATCGAAAAAGCGGCTGCTGC CTGCGCTCAGCGAGCTTTTTCCAATATGGGGCAGATCTGCATCAGCGTCAACCGGGTATATGTAGCAGATGAGGTGGCAG AGGAGTTCACCGATAGACTGGTCCATCAGACCGAGCGGCTGCGGATTGGCAACGGCCTGAAAGAGAATGTGGACCTGGGG CCGATGTTCAGCAATGAGCAGCGTGAGAAGACCAAAGAGCATATGAAGGACGCCCTTGATAGGGGAGCAGAGCTCCTCTG CGGCGGCCGGGAGCCGGAGGGGGAGGCATTCGAAAAGGGCTACTTTTTCCTGCCCACCGTCCTGGATCGGGCCGACCACA AGATGAAGATCATGAGAGAGGAGACTTTTGGCCCAGTAGCTCCGATTATGAGATTCGAGACCGTTGACGAGGCCATAAAG CTGGCTAACGACTCGAATTACGGCCTGGCCGCATACATATACACTAGCGACATTGCCACGGGCATTCAGGCAGCAGAAAG GCTGGAGGCGGGAGGGGTGGGGGTTAACATAAACAATGTGATGGACTATCAGATGCCTTTTGGTGGCTGGAAGGAGAGCG GCATCGGTCGGGAGCTGGGGCACTATGGCCTGGAGTCATTCCTGGAGATAAAGCACATCCGTCTGGGGATTTGA Protein sequence : MHQTHMIIDGEQLPISSHKVETICNPANQEPVALVSVGTRQDARMALEAAKKAFPLWSETACEKRAELLHSAADLVRERA KSIARLLTQEQGKPLKNARAEILSSAGILDYYAEEGRRNVGEWLATSRGRSVVLRQPVGVAALITPWNYPVDLLSWKVGP CLAAGCTFVAKPPSRAPVAATEFVRAIYDAGLPAGVVNVVHGPGSEVGAELVENPISRKIAFTGETETGRWIMAQAALHI KRVSLELGGQSPFIVCGDADIEKAAAACAQRAFSNMGQICISVNRVYVADEVAEEFTDRLVHQTERLRIGNGLKENVDLG PMFSNEQREKTKEHMKDALDRGAELLCGGREPEGEAFEKGYFFLPTVLDRADHKMKIMREETFGPVAPIMRFETVDEAIK LANDSNYGLAAYIYTSDIATGIQAAERLEAGGVGVNINNVMDYQMPFGGWKESGIGRELGHYGLESFLEIKHIRLGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-80 | 42 |
