Gene Information

Name : MDS_0085 (MDS_0085)
Accession : YP_004377868.1
Strain : Pseudomonas mendocina NK-01
Genome accession: NC_015410
Putative virulence/resistance : Unknown
Product : D-alanyl-D-alanine endopeptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1686
EC number : -
Position : 98926 - 99807 bp
Length : 882 bp
Strand : +
Note : -

DNA sequence :
TTGGGCCTGCTGCTGTGCGGTAGCCTTGTTGTTTCGAACCTCCAGGCCGCGCCGGCCCAGCCCAAGCAGGAGCTGGCTGC
CGGTAGTGCATTGCTGATCGATCTGAAAACCGGCCAGGAGCTGTATTCCAGCAATCCAGACCTACGCCTGCCGGTTGCCT
CGGTCACCAAGCTGATGACCGCTATGGTGGTGCTTGACGCCAAGCTGCCGCTGGACGAGGTGCTGCCGATCACCATCCGC
GATACCCAGGAAATGCAGGGCGTGTTCTCCCGCGTGCGCATTGGCAGCGAGATCACCCGCCGCGACATGCTGCACCTGGC
GCTGATGTCCTCGGAGAACCGTGCCGCCGCCAGCCTCGCGCACCATTATCCGGGCGGCCACGCGGCCTTCGTCGCTGCGA
TGAACGCCAAGGCCAGGGCGCTGGGGATGCACAACAGCCACTTCGTCGAACCTACCGGCCTGTCCGAACAGAACGTTGCC
ACCGCCCGTGATCTGGCGCTGATGGTTAAGGCGGCCAACCAGTACCCGCTGATCCACCAGTTCAGTACCGATTCCGAAGC
CACCGTGGCCTTCCGCAAGCCCAACTACACCCTGGGCTTTCGCAATACCAATGCACTGGTGCGCAAGGCGGACTGGAACA
TCAACCTGAGCAAGACCGGCTTCACCAATGCCGCTGGTCGTTGCCTGGTGATGGCCACCACCATCGCCAACCGTCCGGTG
GCCTTCGTGGTGCTCGGTGCCTTTGGCAAGTACACCCATATGGCCGACGCCAACCGCCTCAAGCGCTGGATGGAGACCGG
CAAGGTCACCCCGGTGCCGGCTGCTGCGCTCAGCTACAAGCAGCAGAAGCTGGCCGAGTGGAGCCTGCAGGCCGCGCAGT
GA

Protein sequence :
MGLLLCGSLVVSNLQAAPAQPKQELAAGSALLIDLKTGQELYSSNPDLRLPVASVTKLMTAMVVLDAKLPLDEVLPITIR
DTQEMQGVFSRVRIGSEITRRDMLHLALMSSENRAAASLAHHYPGGHAAFVAAMNAKARALGMHNSHFVEPTGLSEQNVA
TARDLALMVKAANQYPLIHQFSTDSEATVAFRKPNYTLGFRNTNALVRKADWNINLSKTGFTNAAGRCLVMATTIANRPV
AFVVLGAFGKYTHMADANRLKRWMETGKVTPVPAAALSYKQQKLAEWSLQAAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00303 YP_008207768.1 D-alanyl-D-alanine carboxypeptidase Not tested AbaR25 Protein 3e-49 47
BJAB0868_00307 YP_008211633.1 D-alanyl-D-alanine carboxypeptidase Not tested AbaR26 Protein 3e-49 47