|
Name : MDS_0778 (MDS_0778) Accession : YP_004378561.1 Strain : Pseudomonas mendocina NK-01 Genome accession: NC_015410 Putative virulence/resistance : Virulence Product : urease subunit alpha Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0804 EC number : - Position : 852709 - 854409 bp Length : 1701 bp Strand : - Note : - DNA sequence : ATGAAAATCAGCAGACAAGCCTACGCCGACATGTTCGGCCCCACCGTCGGCGACAAGGTGCGCCTGGCCGATACCGACCT GTGGATCGAGGTGGAGAAGGACTTCACCACCTACGGCGAAGAAGTGAAATTCGGCGGCGGCAAGGTGATCCGCGACGGCA TGGGCCAGGGCCAGCTGTGCGCCGCCGATGTGGTCGACACCCTGATCACCAACGCCCTGATCATCGACCACTGGGGCATC GTCAAAGCCGACGTCGGCCTCAAGGACGGGCGCATCGCCGCCATCGGCAAGGCCGGCAACCCGGATATCCAACAGGACGT GACCATCGCCATCGGCGCGGGCACCGAGGTGATCGCCGGTGAAGGCATGATCCTCACCGCGGGCGGCATCGACACCCACA TCCACTTCATCTGCCCGCAGCAGATCGAAGAAGCGTTGATGAGCGGCGTCACCACCATGATCGGCGGCGGCACCGGGCCG GCCACAGGCACCAACGCCACCACCTGCACCTCCGGGCCCTGGCATATGGCGCGCATGCTGCAAGCCGCCGACGCCTTCCC GATGAATCTGGGCTTTACCGGCAAGGGCAACGCCTCGCTGCCCGAGCCTTTGATCGAGCAGGTGAAAGCCGGCGCCATTG GCCTCAAGCTGCACGAGGACTGGGGCACCACCCCGGCGGCCATCGACAACTGCCTGTCAGTCGCCGATGAATACGACGTG CAGGTGGCGATCCACACCGACACGCTGAACGAGTCCGGCTTCGTCGAAACCACCCTTGGCGCGTTCAAGGGCCGCACCAT CCACACCTATCACACCGAGGGTGCCGGCGGCGGCCACGCACCGGACATCATCAAGGCCTGCGGCTTCCCCAACGTGCTGC CGTCCTCGACCAACCCGACCCGCCCGTTCACCAAGAACACCATCGACGAGCACCTGGACATGCTCATGGTCTGCCACCAC CTCGACCCAAGCATCGCCGAGGACGTGGCCTTTGCCGAAAGCCGCATCCGCCGCGAGACCATCGCCGCCGAGGACATCCT GCATGACCTGGGCGCGTTCTCCATGATCAGCTCCGACAGCCAGGCCATGGGCCGCGTCGGCGAGGTGATCACGCGCACCT GGCAGACCGCCGACAAGATGAAGAAGCAGCGCGGCCCGCTGCCCGAGGACGCCCCCGGCAACGACAACTTCCGCGCCAAG CGCTACATCGCCAAATACACCATCAACCCGGCGATCACCCACGGTATCAGCCACGAAGTGGGCTCGATCGAAGTGGGTAA GTGGGCCGATCTGGTGCTCTGGCGCCCGGCCTTCTTCGGCGTCAAGCCGACGCTGATCCTCAAGGGTGGGGCGATTGCCG CCAGCCTGATGGGCGACGCCAACGCTTCGATCCCGACGCCGCAACCGGTGCACTACCGGCCGATGTTCGCCAGCTACGCC GGCAGCCGTCATGCCACCAGCATCACCTTTATCAGCCAGGCGGCGTTCGACGCCGGGGTGCCGCAGCAGCTCGGATTGCA GAAGCAGATTGGCGTGGTCAAGGGCTGTCGCGAGGTGCAGAAAACCGACCTGATCCACAACGGCTACCTGCCGAATATCG AGGTCGATCCGCAGAACTATCAGGTCAAGGCCGACGGCCAATTGCTCTGGTGCGAGCCGGCCGACGTGCTACCGATGGCG CAGCGGTATTTCCTGTTCTGA Protein sequence : MKISRQAYADMFGPTVGDKVRLADTDLWIEVEKDFTTYGEEVKFGGGKVIRDGMGQGQLCAADVVDTLITNALIIDHWGI VKADVGLKDGRIAAIGKAGNPDIQQDVTIAIGAGTEVIAGEGMILTAGGIDTHIHFICPQQIEEALMSGVTTMIGGGTGP ATGTNATTCTSGPWHMARMLQAADAFPMNLGFTGKGNASLPEPLIEQVKAGAIGLKLHEDWGTTPAAIDNCLSVADEYDV QVAIHTDTLNESGFVETTLGAFKGRTIHTYHTEGAGGGHAPDIIKACGFPNVLPSSTNPTRPFTKNTIDEHLDMLMVCHH LDPSIAEDVAFAESRIRRETIAAEDILHDLGAFSMISSDSQAMGRVGEVITRTWQTADKMKKQRGPLPEDAPGNDNFRAK RYIAKYTINPAITHGISHEVGSIEVGKWADLVLWRPAFFGVKPTLILKGGAIAASLMGDANASIPTPQPVHYRPMFASYA GSRHATSITFISQAAFDAGVPQQLGLQKQIGVVKGCREVQKTDLIHNGYLPNIEVDPQNYQVKADGQLLWCEPADVLPMA QRYFLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ureC | NP_286680.1 | urease subunit alpha | Virulence | TAI | Protein | 0.0 | 75 |
| ureC | NP_287088.1 | urease subunit alpha | Not tested | TAI | Protein | 0.0 | 75 |
| ureC | YP_005684266.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 1e-164 | 62 |
| ureC | YP_005682174.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 2e-164 | 62 |
| ureC | YP_003784325.1 | urease subunit alpha | Not tested | PiCp 7 | Protein | 2e-164 | 62 |
| ureC | YP_005686358.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 2e-164 | 62 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| MDS_0778 | YP_004378561.1 | urease subunit alpha | VFG0270 | Protein | 7e-160 | 65 |
