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Name : MDS_0682 (MDS_0682) Accession : YP_004378465.1 Strain : Pseudomonas mendocina NK-01 Genome accession: NC_015410 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 738357 - 740240 bp Length : 1884 bp Strand : - Note : - DNA sequence : ATGAGCGCACAACAACAAAAGAATCTGAGTGAGTCGGCACAGGTCGACCAGCAGTCGGTGCAACCCTTCCCCCGTTCGCA GAAAGTCTACGTACAAGGCTCGCGCCCGGACATTCGCGTGCCGATGCGTGAAATCAGCCTGGACGTGACGCCCACAGACT TTGGTGGCGAGATCAACGCTCCGGTCACCGTCTACGACACCTCCGGCCCCTACACCGATCCGAACGTCATCATCGACGTG CGCAAGGGCCTGGCCGATGTGCGCAGCGCCTGGATCGAGGATCGCGGCGATACCGAGAAGCTGCCGGGCCTGTCCTCCGA GTTCGGCCAGCGCCGCCTCAACGATGCCGAGCTGTCGGCCATGCGCTTCGCCCACGTGCGCAATCCGCGCCGGGCCAAGG CCGGGCACAACGTCAGCCAGATGCACTACGCCAAGAAAGGCATCATCACGCCGGAGATGGAATACGTCGCCATCCGCGAG AACATGAAGCTGGCCGAAGCGCGCGAAGCCGGCCTGCTCAATGAGCAGCACGCAGGCCATAGCTTCGGCGCCAGCATTCC CAAGGAAATCACTCCCGAATTCGTGCGCAGTGAAGTCGCGCGCGGCCGCGCCATCATCCCCGCCAACATCAACCACGTGG AGCTGGAGCCGATGATCATCGGCCGCAACTTCCTGGTGAAGATAAACGGTAATATCGGTAACTCGGCACTGGGTTCTTCC ATCGAGGAAGAAGTGGCCAAGCTGACCTGGGGCATCCGCTGGGGCTCGGATACGGTCATGGATCTGTCCACCGGCAAGCA CATTCACGAAACCCGCGAGTGGATCATCCGCAACTCGCCGGTACCGATCGGCACCGTGCCGATCTACCAGGCGCTGGAGA AGGTCGGCGGCATCGCCGAAGACCTGACCTGGGAGCTGTTCCGCGACACCCTGATCGAGCAGGCCGAGCAGGGCGTGGAT TACTTCACCATACACGCCGGCGTGCTGCTGCGTTACGTGCCGCTGACCGCCAAGCGCGTGACCGGCATCGTCAGCCGCGG CGGCTCGATCATGGCCAAGTGGTGCCTGGCGCATCACAAGGAAAACTTCCTCTACACCCATTTCGACGACATCTGCGAAA TCATGAAGGCCTACGACGTGTCCTTCTCGCTGGGTGACGGCCTGCGTCCCGGCTCGATTGCCGACGCCAACGACGCCGCG CAGTTCGGCGAACTGGAAACCCTCGGCGAGCTGACCAAGATCGCCTGGAAACACGACGTGCAGTGCATGATCGAAGGCCC CGGCCACGTGCCGATGCAGCTGATCAAGGAGAACATGGACAAGCAGCTGGAATGCTGCGACGAGGCGCCGTTCTACACCC TCGGCCCGCTGACCACCGACATCGCACCGGGCTACGACCACATCACCAGCGGCATCGGCGCGGCGATGATCGGCTGGTTC GGTTGCGCCATGCTCTGCTACGTCACGCCCAAGGAGCACCTGGGCCTGCCGAACAAGGATGACGTGAAGACCGGCATCAT CACCTACAAGATCGCCGCCCATGCGGCCGACCTGGCCAAGGGTCATCCAGGCGCGCAGATCCGCGACAACGCGCTCTCCA AGGCGCGCTTCGAGTTCCGCTGGGAGGATCAGTTCAACCTCGGCCTCGACCCGGACACCGCGCGCGCCTACCACGACGAG ACGCTGCCGAAAGACTCGGCCAAGGTGGCCCACTTCTGCTCCATGTGCGGGCCGAAGTTCTGCTCGATGAAGATCACTCA GGAAGTGCGTGAATACGCCAAGGATCAGCGCATCGACACCGTCGACCTGGAAGCCAAGCAGGGCATGCAGGCCAAGGCCG AGGAGTTCAAGGCGCAGGGCAGCCAGCTGTATCAGAAGGTATAA Protein sequence : MSAQQQKNLSESAQVDQQSVQPFPRSQKVYVQGSRPDIRVPMREISLDVTPTDFGGEINAPVTVYDTSGPYTDPNVIIDV RKGLADVRSAWIEDRGDTEKLPGLSSEFGQRRLNDAELSAMRFAHVRNPRRAKAGHNVSQMHYAKKGIITPEMEYVAIRE NMKLAEAREAGLLNEQHAGHSFGASIPKEITPEFVRSEVARGRAIIPANINHVELEPMIIGRNFLVKINGNIGNSALGSS IEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVGGIAEDLTWELFRDTLIEQAEQGVD YFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHHKENFLYTHFDDICEIMKAYDVSFSLGDGLRPGSIADANDAA QFGELETLGELTKIAWKHDVQCMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWF GCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLGLDPDTARAYHDE TLPKDSAKVAHFCSMCGPKFCSMKITQEVREYAKDQRIDTVDLEAKQGMQAKAEEFKAQGSQLYQKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 77 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 77 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 74 |
