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Name : MDS_0518 (MDS_0518) Accession : YP_004378301.1 Strain : Pseudomonas mendocina NK-01 Genome accession: NC_015410 Putative virulence/resistance : Virulence Product : betaine aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 556820 - 558292 bp Length : 1473 bp Strand : - Note : - DNA sequence : ATGCCCCGTTTCGCCGAACAGCAGCTCTACATCGGTGGCCAGTACGTCGCCGCCAGCAGTGGAGAAACCTTCGACAGCAT CAACCCGGCAACCGGCGAGGTGCTGGCCAAGGTGCAGCGCGCCAGCCAGGCGGATGTCGACCGTGCCGTGGCCAGCGCTG CCGAGGGGCAGAAGGTATGGGCGGCGATGACCGCCATGCAGCGCTCACGCATCCTGCGCAAGGCGGTGGGCATCCTGCGT GAGCGCAACGACGAACTGGCCGAACTGGAAACCCTCGACACCGGCAAGCCACTGTCCGAAACCCGCTACGTCGACATCGT CACCGGCGCCGATGTGCTGGAGTATTACGCGGGCCTGATCCCGGCCATCGAGGGCGAACAGATCCCGCTGCGCGAGACCT CCTTCGTCTACACCCGCCGCGAGCCGCTGGGCGTGGTCGCCGGCATCGGCGCATGGAACTACCCGATCCAGATCGCCCTG TGGAAATCCGCACCGGCCCTGGCTGCCGGTAACGCCATGATCTTCAAGCCCAGCGAGGTCACCTCGCTGACCGCGCTGAA ACTGGCCGAGATCTACACCGAGGCCGGCCTGCCCGCAGGCGTGTTCAACGTGCTTACCGGCAGCGGCCGCGAAGTCGGCC AGTGGCTGACCGAGCATCCGGGCATCGAGAAAATCTCCTTCACCGGCGGCACCGTCACCGGCAAGAAAGTGATGGCCAGC GCCTCCAGCTCCAGCCTCAAGGAAGTGACCATGGAGCTGGGCGGCAAGTCGCCCTTGATTATCTTCGAGGACGCCGACCT GGACCGTGCCGCCGATATCGCGGTGATGGCCAACTTCTACAGTTCCGGTCAGGTGTGCACCAACGGCACCCGCGTATTCG TGCCGCGCATGCTGCAGGCGCGTTTCGAGGCCAAGGTGCTGGATCGGGTCAAGCGCATCCGCCTTGGCGATCCACTGAAC GACACCACCAATTTCGGCCCGCTGGTCAGCCATGCGCACATGGAAAGCGTGCTCGGCTACATCGACAAGGGCCGCAGCGA AGGTGCCCGCCTGCTGATTGGCGGTGCACGGGTGACCGACGGCGAGTACGCCAACGGCGCCTACGTTGCGCCGACCGTGT TCACCGACTGCACGGATGCCATGACCATCGTGCGCGAGGAAATCTTCGGTCCGGTGATGAGCATCCTCATCTACGACGAC GAAGAGGAAGTGATTCGCCGCGCCAACGACACCGATTACGGCCTCGCTGCCGGCGTGGTGACCCGCGACCTCAACCGTGC ACACCGGGTGATCCACAAGCTGGAAGCCGGCATCTGCTGGATCAACACCTGGGGCGAGTCGCCAGCCGAGATGCCGGTGG GCGGCTACAAGCAATCCGGTGTCGGCCGCGAGAACGGTCTGGTCACCCTCGGCCACTACACCCGCATCAAGTCGGTGCAG TTGGAAATGGGCGATTACGCGTCAGTGTTCTGA Protein sequence : MPRFAEQQLYIGGQYVAASSGETFDSINPATGEVLAKVQRASQADVDRAVASAAEGQKVWAAMTAMQRSRILRKAVGILR ERNDELAELETLDTGKPLSETRYVDIVTGADVLEYYAGLIPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPIQIAL WKSAPALAAGNAMIFKPSEVTSLTALKLAEIYTEAGLPAGVFNVLTGSGREVGQWLTEHPGIEKISFTGGTVTGKKVMAS ASSSSLKEVTMELGGKSPLIIFEDADLDRAADIAVMANFYSSGQVCTNGTRVFVPRMLQARFEAKVLDRVKRIRLGDPLN DTTNFGPLVSHAHMESVLGYIDKGRSEGARLLIGGARVTDGEYANGAYVAPTVFTDCTDAMTIVREEIFGPVMSILIYDD EEEVIRRANDTDYGLAAGVVTRDLNRAHRVIHKLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLVTLGHYTRIKSVQ LEMGDYASVF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 7e-76 | 41 |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 1e-76 | 41 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-78 | 41 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-78 | 41 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-78 | 41 |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 2e-82 | 41 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 4e-78 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| MDS_0518 | YP_004378301.1 | betaine aldehyde dehydrogenase | VFG0082 | Protein | 3e-76 | 41 |
