|
Name : MDS_4839 (MDS_4839) Accession : YP_004382622.1 Strain : Pseudomonas mendocina NK-01 Genome accession: NC_015410 Putative virulence/resistance : Unknown Product : NlpA lipoprotein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1464 EC number : - Position : 5299036 - 5299806 bp Length : 771 bp Strand : + Note : - DNA sequence : ATGAAGAAGCTGCTGACTGCCATCGCCGCTTGCGCGGCCTTCTCGGCCCAGGCCGAAACCCTCAGCGTCGCTGCCACTCC GGTACCGCACGCGGAGATCCTCGAGTTCGTCAAACCGGCTCTGGCCAAAGAAGGCGTGGAGCTGAAGGTGCGTGTGTTCA CCGACTACGTGCAGCCCAACCTGCAGGTACAGCAGAAGAACCTCGATGCCAACTTCTTCCAGCACCAGCCGTATCTGGAC GAGTTCAACGCCAGCCGCAAGACCGATCTGGTCAACGTTGCCGGCGTACACGTCGAGCCCTTCGGCGCCTACTCCAGCAA GATCAAGGACCTGAACGAGCTGCCGCAAGGCGCCACCGTGGCCATCCCCAACGACGCCACCAACGGCGGCCGCGCCCTGC TGCTGCTGCAGAAGGCTGGTGTGATCAAGCTCAAGCCGGAAGCCGGCATACTCGCCACGCCGAAGGACATCGTCGAGAAT CCGAAAGGCATCAAGGTGCGTGAGCTGGAAGCCGCCACCCTGCCGCGCGTGCTGAGCCAGGTCGACCTTGCCCTGATCAA CACCAACTACGCCCTGGAAGCCAAGCTGAACCCGACCAAGGATGCTCTGGCCATCGAAGGCAGTGACTCGCCGTACGTGA ACATCCTGGTGACCCGCGCTGACAACAAGGACAGCGACGCCGTGCAGAAACTGGTCAAGGCCCTGCATAGCGCCGAAGTG AAGCAGTTCATCGAAGAGAAGTATCAGGGCGCCGTCGTACCGGCGTTCTGA Protein sequence : MKKLLTAIAACAAFSAQAETLSVAATPVPHAEILEFVKPALAKEGVELKVRVFTDYVQPNLQVQQKNLDANFFQHQPYLD EFNASRKTDLVNVAGVHVEPFGAYSSKIKDLNELPQGATVAIPNDATNGGRALLLLQKAGVIKLKPEAGILATPKDIVEN PKGIKVRELEAATLPRVLSQVDLALINTNYALEAKLNPTKDALAIEGSDSPYVNILVTRADNKDSDAVQKLVKALHSAEV KQFIEEKYQGAVVPAF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nlpA | AAW51766.1 | NlpA | Not tested | AGI-3 | Protein | 7e-39 | 44 |
| SAAV_0786 | YP_003281709.1 | ABC transporter substrate-binding protein | Not tested | SaPIAv | Protein | 2e-40 | 41 |
