Gene Information

Name : MDS_4729 (MDS_4729)
Accession : YP_004382512.1
Strain : Pseudomonas mendocina NK-01
Genome accession: NC_015410
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 5175811 - 5177886 bp
Length : 2076 bp
Strand : +
Note : -

DNA sequence :
GTGAGCGAGCTGTCAGCGGTTCCCGTCACCGCGCTGAAAGGCGTAGGCGCCGCGCTGGCGGAAAAACTGGCCAAGGTCGG
CCTGGAAAACCTGCAGGATGTGCTGTTCCACCTGCCGCTGCGCTATCAGGATCGCACCCGCATCACCCCCATTGGCGCCC
TGCGACCCGGGCAGGATGCGGTGGTCGAGGGCATCGTTGCCGGTGCCGACGTGGTCATGGGCCGGCGGCGCAGCCTGCTG
GTGCGTCTGCAGGACGGCAGTGGCACGCTGAGCCTGCGCTTCTTCCATTTCAGCCAGGCGCAGAAGGAAGGGCTCAAACG
CGGCACGGCGCTGCGCTGCTATGGCGAAGTGCGCCCCGGCGCCACCGGCCTGGAGATCTATCACCCGGAGTATCGCGCGC
AGAGCGGCGACGAGCCGGCCCCGGTGGAGCAGAGCCTGACGCCCATCTATCCGACCACCGAAGGCCTGACCCAGCAACGC
CTGCGCCAGCTCAGTCAGCAGGCGCTGGCGCGCCTGGGCCCGCGCAGCCTGCCAGACTGGCTGCCTGACGAGCTGGCCCG
CGACTATCGCCTGGCGCCTTTGGATGAGGCCATCCGTTATCTGCATCGCCCGCCGCCGGACGCCGATGTCGAAGAACTCG
CCGAGGGCCGTCACTGGGCGCAACACCGCCTGGCCTTCGAGGAATTGCTGACCCATCAGCTGTCCCTGCAGCGCCTGCGC
GAACAGGTGCGCGCGCAACAGGCGCCGGCGCTGCCGCCAGCGAAGAAGCTGCCGCAGCAATACCTTGCCAACCTCGGCTT
CGCCCCCACCGGCGCGCAGCAGCGCGTCGGTGCCGAGATCGCCTATGACCTGGCGCAAAGCGAGCCGATGCTGCGCCTGG
TGCAGGGCGACGTCGGTGCCGGCAAGACGGTGGTCGCCGCCCTGGCTGCATTGCAGGCGCTGGAGGCCGGCTACCAGGTG
GCATTGATGGCGCCCACCGAAATTCTCGCCGAGCAGCACTTCCTCAACTTCAGCAAATGGCTGGCACCGCTTGGCCTGGA
AGTGGCCTGGCTGGCCGGCAAGCTCAAGGGCAAGGCCCGCGCCGCCGCACTGGATCAGATCGCCGCTGGTTGCCCGATGG
TGGTCGGCACCCATGCCCTGTTCCAGGACGAGGTGAAGTTCAAACGCCTGGCCCTCGTGATCATCGACGAGCAGCACCGC
TTCGGCGTGCAGCAACGCCTGGCCTTGCGCCAGAAAGGCATCGACGGGCGCTTGAGCCCGCATCAGCTGATCATGACCGC
CACACCTATCCCACGCACCCTGGCGATGAGCGCCTACGCCGATCTGGATACCTCGATTCTCGACGAGCTGCCGCCGGGAC
GTACACCGGTCAACACCCTGGTGATCGCCGACAGCCGCCGCATCGAGGTGGTCGAGCGCGTGCGCAACGCCTGCCAGCAG
GGTCGCCAGGCCTACTGGGTGTGCACGCTGATCGAAGAGTCCGAGGAACTGACCTGCCAGGCTGCGGAAACCAGCTACGA
GGAGTTGTCCGCCGCACTTGGCGAGCTGCGCGTCGGGCTGATCCACGGGCGCATGAAACCGGCCGAAAAGGCCGCAGTGA
TGGAAGAATTCAAGCAGGGCAGCTTGCAGCTTCTGGTGGCGACCACGGTAATCGAGGTGGGCGTCGACGTCCCCAACGCC
AGCCTGATGATCATCGAAAACCCCGAGCGCCTTGGCCTGGCCCAGCTGCACCAGTTGCGCGGCCGGGTTGGTCGGGGCAG
TGCGGCCAGCCACTGCGTGCTGCTCTACCACGCACCGCTGTCGCAGCTCGGCCGCGAACGCCTGGCGATCATGCGTGAAA
CCACCGATGGCTTCGTTATCGCCGAGAAGGATCTGGAACTGCGCGGCCCCGGTGAAATGCTCGGTACCCGGCAGACCGGT
CTGCTGCAGTTCAAGGTCGCCGACCTGATGCGCGACGCCGATCTGCTGCCTGCAGTTCGCGATGCCGCACAGGCACTTTT
GGAACATTGGCCACAACATGTGGCTCCATTGTTGGAACGCTGGTTGCGTCATGGCCAGCAATACGGTCAAGTGTGA

Protein sequence :
MSELSAVPVTALKGVGAALAEKLAKVGLENLQDVLFHLPLRYQDRTRITPIGALRPGQDAVVEGIVAGADVVMGRRRSLL
VRLQDGSGTLSLRFFHFSQAQKEGLKRGTALRCYGEVRPGATGLEIYHPEYRAQSGDEPAPVEQSLTPIYPTTEGLTQQR
LRQLSQQALARLGPRSLPDWLPDELARDYRLAPLDEAIRYLHRPPPDADVEELAEGRHWAQHRLAFEELLTHQLSLQRLR
EQVRAQQAPALPPAKKLPQQYLANLGFAPTGAQQRVGAEIAYDLAQSEPMLRLVQGDVGAGKTVVAALAALQALEAGYQV
ALMAPTEILAEQHFLNFSKWLAPLGLEVAWLAGKLKGKARAAALDQIAAGCPMVVGTHALFQDEVKFKRLALVIIDEQHR
FGVQQRLALRQKGIDGRLSPHQLIMTATPIPRTLAMSAYADLDTSILDELPPGRTPVNTLVIADSRRIEVVERVRNACQQ
GRQAYWVCTLIEESEELTCQAAETSYEELSAALGELRVGLIHGRMKPAEKAAVMEEFKQGSLQLLVATTVIEVGVDVPNA
SLMIIENPERLGLAQLHQLRGRVGRGSAASHCVLLYHAPLSQLGRERLAIMRETTDGFVIAEKDLELRGPGEMLGTRQTG
LLQFKVADLMRDADLLPAVRDAAQALLEHWPQHVAPLLERWLRHGQQYGQV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 4e-99 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MDS_4729 YP_004382512.1 ATP-dependent DNA helicase RecG BAC0356 Protein 0.0 90