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Name : MDS_4642 (MDS_4642) Accession : YP_004382425.1 Strain : Pseudomonas mendocina NK-01 Genome accession: NC_015410 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit A Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2060 EC number : - Position : 5086202 - 5087890 bp Length : 1689 bp Strand : - Note : - DNA sequence : ATGCACGACTACGACTGGCTGCTGGTGGTGGCCTTCTTACTGCTGGTGCTGGCGCCGGCACCTTTTCTCGGACGCTACTT CTACCGGGTGATGGAGGGCCAGCGCACCTGGCTCAGCCCGTTGCTGCAGCCGGTGGAGCGCCTGTGCTACCGCGTGGCTG GCGTCGACCCTGAGCAGGAGCAGAGCTGGCGCGGTTACGCTCTGGCGCTGCTGGCCTTCACCCTGGTCTGCCTGCTGGCG CTGATGAGCATTCTGTTGCTGCAGGGCGGCTTGCCGCTCAACCCGCAGCAGCTCGCCGGGCTGAGCCTGCCGCTGGCGTT CAACACGGCGGTGAGCTTCGTCACCAACACCAACTGGCAGGCCTACAGCGGCGAGGCGCAGCTGAGTTATTTCAGCCAGA TGCTCGGCCTCGGCGTGCAGAACTTCGTCAGCCCGGCGGTGGGTCTGGCGGTGCTGGTGGTGCTGTGCCGGGGTTTGGCG CGGCAGTCCAGCGACCGCCTGGGCAACTTCTGGGTGGATATCACTCGTGCCGTGCTCTACGGCCTGTTGCCGCTGTGTCT GGTGCTGGCTGTGCTGCTGGTGTGGCAGGGCGTGCCGCAGAACTTCAGCGATTACATCTCCGCCACCACCCTGCAGGGCA GCCAGCAGACCCTGCCGATGGGCCCGGCGGCCAGCCAGATTGCGATCAAGCAACTGGGCACCAACGGCGGCGGCTTCTTC GGCGTCAACTCGGCGCATCCGTTCGAGAACCCCACGGCGCTGAGCAATCTGCTGGAGCTGGCGTCGATTCTGCTGATCCC GGCGGCGCTGGTGTTCACCTTCGGCCATTACGTGCGTGACCTGCGCCAGAGCCGGGCGATCCTCGCCAGCATGCTGCTGT TGTTCGTCATCGGCTTGGGCGTGTGCGCCTGGGCGGAGTTGCAGCCGAACCCGGCGCTGGCGGGGCTGCTCATTGAGCAG GTCGGCTCGCTGGAGGGCAAGGAGGCGCGCTTTGGCAGCTTCGCCTCGGCGCTCTGGGCCACAGCTACCACGGCGGCGTC CAATGGCTCGGTCAACTCGATGCATGATAGCTTCAGCGCTCTCGGCGGGCTGGTGCCGCTGGTCAATATGCTGCTCGGCG AGATCGTTTTCGGCGGCGTCGGCGCGGGCCTCTACGGCATGCTGCTGTTCGTGTTGATCGCGGTGTTCCTCGCCGGCCTG ATGATCGGCCGCACCCCGGCTTACCTGGGCAAGAAGCTGGAAGCCCGCGAAGTACGGCTGATGGTCGCCACGCTGCTGGT GATGCCGGTCGGCGTGCTGGTATTCGGCGCCCTGGCGGTGAGTTTCCCTGGGCCTGCGGCCTCCATCGGCAACCCCGGCC CGCACGGCTTCAGCCAGGCGCTGTATGCCTACGGTTCGGCCACCGCCAACAACGGCTCGGCCTTCGCCGGCTTCACCGCC GATACCCCATACCACAACCTGATGCTCGGCCTGGCCATGCTGCTCGGGCGCTTCGGCTACATCCTGCCGGTGCTGGCGAT TGCCGGCAGCCTGGCGGCCAAGCGCGCCGCGCCGCAGGGGCAGAACAGCTTCCCCACCCATGGGCCGTTGTTCGTCGTGC TGCTGACGTTGACCATCCTCCTAGTGGGTGGCCTGACCTTCATGCCGGCGCTGGCCCTGGGCCCGCTGGCCGAACACCTG GCGTTCTGA Protein sequence : MHDYDWLLVVAFLLLVLAPAPFLGRYFYRVMEGQRTWLSPLLQPVERLCYRVAGVDPEQEQSWRGYALALLAFTLVCLLA LMSILLLQGGLPLNPQQLAGLSLPLAFNTAVSFVTNTNWQAYSGEAQLSYFSQMLGLGVQNFVSPAVGLAVLVVLCRGLA RQSSDRLGNFWVDITRAVLYGLLPLCLVLAVLLVWQGVPQNFSDYISATTLQGSQQTLPMGPAASQIAIKQLGTNGGGFF GVNSAHPFENPTALSNLLELASILLIPAALVFTFGHYVRDLRQSRAILASMLLLFVIGLGVCAWAELQPNPALAGLLIEQ VGSLEGKEARFGSFASALWATATTAASNGSVNSMHDSFSALGGLVPLVNMLLGEIVFGGVGAGLYGMLLFVLIAVFLAGL MIGRTPAYLGKKLEAREVRLMVATLLVMPVGVLVFGALAVSFPGPAASIGNPGPHGFSQALYAYGSATANNGSAFAGFTA DTPYHNLMLGLAMLLGRFGYILPVLAIAGSLAAKRAAPQGQNSFPTHGPLFVVLLTLTILLVGGLTFMPALALGPLAEHL AF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpA | NP_814333.1 | potassium-transporting ATPase subunit A | Not tested | Not named | Protein | 6e-73 | 49 |
| ef0087 | AAM75290.1 | EF0087 | Not tested | Not named | Protein | 4e-73 | 49 |
| truncated-kdpA | NP_370596.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 1e-60 | 43 |
| kdpA | NP_373308.2 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 1e-60 | 43 |
| kdpA | YP_190030.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 1e-60 | 43 |
| kdpA | YP_251948.1 | potassium-transporting ATPase subunit A | Not tested | SCCmec | Protein | 2e-61 | 43 |
| unnamed | BAB43902.1 | potassium-transporting ATPase(A chain) | Not tested | Type-II SCCmec | Protein | 8e-61 | 43 |
| SAR0070 | YP_039538.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 1e-60 | 43 |
