Gene Information

Name : MDS_4637 (MDS_4637)
Accession : YP_004382421.1
Strain : Pseudomonas mendocina NK-01
Genome accession: NC_015410
Putative virulence/resistance : Resistance
Product : two component response regulator KdpE
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 5080040 - 5080732 bp
Length : 693 bp
Strand : -
Note : -

DNA sequence :
ATGAGCCAGGGGCCGAGCATTCTGTTGATCGACGATGAAGCGCAGATTCGCAAGTTCCTGCGCATCGCCCTCAGCGCCCA
GGACTACCGGGTGCTGGAGGCGGTCAACGGCGAAGACGGCCTGGCCCAGGCGGCGCTGCACAACCCGGATGTGGTGGTGC
TCGACCTCGGCCTGCCCGACCTCGATGGCCAGCAGGTGCTGCGCGGCCTGCGCGAATGGAGCCAGGTGCCGGTGCTGGTG
CTCTCGGTGCGTGCCAGCGAGGGCGAGAAGGTACTGGCGCTGGACGGCGGCGCCAACGACTACGTGACCAAGCCGTTCGG
CATCCAGGAATTCCTCGCCCGGGTGCGCGTGCTGCTGCGCCAAGGGCAGGGCCGCGAAGCATTACCGGCGAGCATCGCCT
GCGGCGCACTGAGCATCGACCTGGCCTATCGCCGGGTCAGCCTCGAGGGTGCCGAAATCGCCCTGACACCCAAGGAATAC
GCCGTGCTGGCGCTACTCGCCCAGCATCTCGGGCGGGTGGTCACCCAGCAGCAATTGCTGCGCGATATCTGGGGGCCGAG
CCATGTCGGCGATAGCCACTACCTGCGCGTGGTGGTCGGCCACCTGCGGCAGAAGCTCGGCGACGACCCGGCCGCGCCAC
GCTACCTGATTACCGAGGCCGGTGTTGGCTATCGCCTGCGCGAGCCTGTCTAA

Protein sequence :
MSQGPSILLIDDEAQIRKFLRIALSAQDYRVLEAVNGEDGLAQAALHNPDVVVLDLGLPDLDGQQVLRGLREWSQVPVLV
LSVRASEGEKVLALDGGANDYVTKPFGIQEFLARVRVLLRQGQGREALPASIACGALSIDLAYRRVSLEGAEIALTPKEY
AVLALLAQHLGRVVTQQQLLRDIWGPSHVGDSHYLRVVVGHLRQKLGDDPAAPRYLITEAGVGYRLREPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 3e-34 43
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 2e-34 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MDS_4637 YP_004382421.1 two component response regulator KdpE NC_012469.1.7685629. Protein 2e-29 41