Gene Information

Name : MDS_4557 (MDS_4557)
Accession : YP_004382340.1
Strain : Pseudomonas mendocina NK-01
Genome accession: NC_015410
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 4992069 - 4992521 bp
Length : 453 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAATCGGAGAATTGGCGAGAAAGGCCGGCTGCCAGGTGGAGACCGTCCGCTACTACGAACGCGAGGGCCTGCTACC
CGCCCCGGCACGGACAGAAGGCAATTACCGCCTGTACGGCAGCCAGCACCTGGAGCGCCTGGTGTTCATCCGCAATTGCC
GGACACTGGACATGACCCTGGAGGAGATCCAGCGGCTGCTGGCCCTGCGCGACCTGCCCCATGAAAGCTGCGCCGGCATC
AACAGCCTGGTGGACGAGCACATCGAGCACGTCGAAGCCCGCATCAACAGTCTGCTGGCACTACGGGACCAGCTCACCGA
GCTGCGTGATCGCTGCAACAGCCCACAGGAATCCGAGGACTGCGGCATCCTGCGTCAGCTCAACGTCAGCGGCGGTGTGC
AGCCACTACCGGACGATGGCCATACCCATGTTGGCAAGAGCCACTCGCATTGA

Protein sequence : 
MKIGELARKAGCQVETVRYYEREGLLPAPARTEGNYRLYGSQHLERLVFIRNCRTLDMTLEEIQRLLALRDLPHESCAGI
NSLVDEHIEHVEARINSLLALRDQLTELRDRCNSPQESEDCGILRQLNVSGGVQPLPDDGHTHVGKSHSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 3e-35 55
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 4e-33 52
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 4e-33 52
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 3e-33 52
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 3e-33 52
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 1e-32 51
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 7e-33 51
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 7e-33 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MDS_4557 YP_004382340.1 MerR family transcriptional regulator BAC0058 Protein 1e-47 62
MDS_4557 YP_004382340.1 MerR family transcriptional regulator BAC0301 Protein 2e-33 58