|
Name : MDS_4556 (MDS_4556) Accession : YP_004382339.1 Strain : Pseudomonas mendocina NK-01 Genome accession: NC_015410 Putative virulence/resistance : Resistance Product : heavy metal translocating P-type ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : - Position : 4989769 - 4991838 bp Length : 2070 bp Strand : - Note : - DNA sequence : ATGGACTGTCCGACGGAAGAACGCCTGATCCGAGACGCATTGGGCCGCCTGCCCGGCGTGACGGGCCTGCAGTTCAACCT GTTGCAGCGGGTGCTCACCGTCAGCCATGACGAGGGGGCGCTGGCCCAGGTAGTACCCGCGATTCAGGCGCTTGGCTTCA CCCCGCAGGTGGAGGATCAAGGCGCTGCTCAACAGCCGGTCGCCGCGCCTGCGAAGAAGCCCTGGTGGCCGCTTGCGCTG GCGGCAGTGCTGGCAACCGCTTCGGAGATGGTGCATTTCGCTGCGCTCGGGCCGGATTGGTGGGTGGCTGTGCTTGCCGT CGTCGCCATCGGGCTGTGTGGGCTGAATACCTACAAGAAGGGTTGGATCGCCCTGAAAAACCGCAACCTCAACATCAACG CCCTGATGAGCATCGCCGTGACCGGTGCGGTGCTGATTGGTCAGTGGCCAGAGGCGGCGATGGTGATGGTGCTGTTCACT CTGGCTGAACTGATAGAGGCGCGCTCGCTGGATCGGGCACGCAACGCCATCCGCGGCCTGATGGATCTGGCGCCACCGCG CGCGACTGTCAGGCAGGCCGATGGCAGTTGGCAGGAAATCGATGTGCAGGTCATTGGCCTGGGCGCCGTGGTACGTGTCC GTCCGGGCGAGCGCATCAGCCTCGATGGCGAAGTGGTCAGCGGCAATTCGACGGTCAACCAGGCGCCCATCACCGGCGAA AGCCTGCCGGTGGAAAAGCGTGCGGGTGACCCGGTATTCGCCGGCACCATCAACGAGGCGGGCTCGCTGGAATTCCGCGT AACGGCAGCGGCACGCGACACGACCCTGGCGCGCATCATCCATGCGGTGGAGGAGGCGCAGGGTTCGCGTGCACCGACCC AACGCTTCGTCGACCAGTTCTCGCGTATCTATACCCCGGTGGTTTTCGTCTTTGCCCTGGCGGTGGCGGTGTTGCCGCCG CTGCTTATCGGTGGCGCCTGGTTCGACTGGGTATACCGCGCCCTGGTACTGCTGGTGGTGGCCTGCCCCTGTGCGCTGGT GATTTCCACTCCGGTGACCATCGTCAGCGGCCTGGCTGCTGCGGCGCGCAAGGGCATCCTGATCAAGGGCGGCGTGTATC TGGAGAATGGCCGCCACCTGGCCCTGCTGGCGCTGGACAAGACCGGCACCCTGACCCATGGCAAACCAGTGCAGACCGAC AGCCTCCACCTGTTGGATGCGGACGAAGCTGTGCATGTGATCTGGGCGGCGAGCCTGGCCGCGCGCTCCGATCACCCGGT TTCCAGAGCGCTGGCCCTGCGAGCTGAAGAGTTGGGTCAAGTGCTGCACAACATCGAGGATTTCGAAGCGCTGCCGGGGC GGGGCACCAAAGGGCGGATCGACGGTAGGTTGCTCTATATGGGTAATCACCGTCTGGTCGAGGACCTCGGGCTCTGCTCG GCGCAGTTGGAGCAGCGTCTCGAAGCGCTGGAGCGTCAGGGCAAGAGCGTAGTGGTGCTGTGTGACGAGCAGCGCGCGCT GATGCTTTTCGCCGTCGCTGACACGGTGCGCCAGACCAGCCGCGAGGCGGTCGCCGAACTGCATGAGCTGGGGGTACGCA CCTGCATGCTCACTGGTGACAACGCCCACACTGCAGCGGCCATCGCCGAGCAGGTCGGCGTCGATGAAGCGCGCGGTGAC CTGCTGCCAGCGGACAAGCTGGCCTGGATCGAGGCGAGTCAGGCACGCGGCAAGGTGGTCGGCATGGTTGGTGATGGCAT CAACGATGCCCCGGCGCTGGCCAGGGCCGAGATCGGTTTCGCCATGGGCGCGGCTGGCACCGATACTGCCATCGAGACGG CCGACGTCGCACTGATGGACGACGATCTGCGCAAGATTCCGGCTTTCGTCCGTCTTTCCCGGCAGACCCACGCGATCCTT CTGCAGAACATCGTCCTGGCGCTGGGCATCAAGGCGATCTTCCTGGGCATGACCCTGGCAGGTGAGGCGACCATGTGGAT GGCGGTGTTCGCCGACATGGGCGTCAGCCTGATGGTTGTATTCAACGGCTTGCGCCTGTTGCGCAAATAA Protein sequence : MDCPTEERLIRDALGRLPGVTGLQFNLLQRVLTVSHDEGALAQVVPAIQALGFTPQVEDQGAAQQPVAAPAKKPWWPLAL AAVLATASEMVHFAALGPDWWVAVLAVVAIGLCGLNTYKKGWIALKNRNLNINALMSIAVTGAVLIGQWPEAAMVMVLFT LAELIEARSLDRARNAIRGLMDLAPPRATVRQADGSWQEIDVQVIGLGAVVRVRPGERISLDGEVVSGNSTVNQAPITGE SLPVEKRAGDPVFAGTINEAGSLEFRVTAAARDTTLARIIHAVEEAQGSRAPTQRFVDQFSRIYTPVVFVFALAVAVLPP LLIGGAWFDWVYRALVLLVVACPCALVISTPVTIVSGLAAAARKGILIKGGVYLENGRHLALLALDKTGTLTHGKPVQTD SLHLLDADEAVHVIWAASLAARSDHPVSRALALRAEELGQVLHNIEDFEALPGRGTKGRIDGRLLYMGNHRLVEDLGLCS AQLEQRLEALERQGKSVVVLCDEQRALMLFAVADTVRQTSREAVAELHELGVRTCMLTGDNAHTAAAIAEQVGVDEARGD LLPADKLAWIEASQARGKVVGMVGDGINDAPALARAEIGFAMGAAGTDTAIETADVALMDDDLRKIPAFVRLSRQTHAIL LQNIVLALGIKAIFLGMTLAGEATMWMAVFADMGVSLMVVFNGLRLLRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C97 | AAN62190.1 | putative metal-transporting P-type ATPase | Not tested | PAGI-2(C) | Protein | 0.0 | 70 |
| SE0075 | NP_763630.1 | cadmium resistance protein B | Not tested | SCCpbp4 | Protein | 4e-113 | 49 |
| cadA | BAC57487.1 | Probable cadmium-transporting ATPase (Cadmium efflux ATPase) | Not tested | Type-IIIinv SCCmec | Protein | 1e-113 | 48 |
| unnamed | BAB47609.1 | cadmium resistance protein B | Not tested | Type-III SCCmec | Protein | 1e-113 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| MDS_4556 | YP_004382339.1 | heavy metal translocating P-type ATPase | BAC0298 | Protein | 0.0 | 68 |
