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Name : MDS_0417 (MDS_0417) Accession : YP_004378200.1 Strain : Pseudomonas mendocina NK-01 Genome accession: NC_015410 Putative virulence/resistance : Unknown Product : RNA-binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 437089 - 439419 bp Length : 2331 bp Strand : - Note : - DNA sequence : ATGGACAGCATCAACAATCGCATCGCCGATGAACTGGGCGTGCGCCCGCAACAGGTTGCCGCCGCCGTGGCCCTGCTCGA CGAAGGTTCCACCGTGCCCTTCATCGCCCGTTACCGTAAAGAAGTGACCGGTAGCCTCGATGATACCCAGTTGCGCCACC TGGAGGAGCGCCTGCGCTACCTGCGCGAGCTGGACGAGCGCCGCGTGGCGATCCTCGCCAGCATCGAGGAACAGGGCAAG CTGACCCCCGAGCTCAAGCGCGAGATCGACCTGGCCGACACCAAGACGCGCCTCGAAGACCTTTACCTGCCGTACAAGCA AAAGCGCCGCACCAAGGGCCAGATCGCCCTGGAAGCCGGCCTCGGCGAGCTGGCCGATGCGCTGTTCAACGACCCGAGCC TGACACCGGAGCAGGAAGCCGAACGCTTCATCGACGCTGACAAAGGCTTCGCCGATGTCAAAGCCGTGCTTGAAGGCGCC AAGTACATTCTCATGGAACGCTTCGCCGAAGACGCCGCGCTGCTCGACAAGCTGCGCAGCTTTCTCAAGGACAACGCCAC CCTCAGTGCCCGCCTGGTGCCGGGCAAGGAAAACGAAGGCGCCAAGTTCAGCGACTACTTCGAGCATGACGAAGCGCTCA AGGGCGTGCCGTCTCACCGCGCGCTGGCGATCTTCCGTGGCCGTAACGAAGGCATCCTCAGCGCCAGCCTCAAGGTCGGC GAAGAACTGCCCGGCACCCTGCACCCGTGCGAGCTGATGATCGGCGAACGCTTCGGCCTGGAGAACAAGGGCCGCGCTGC AGACAAGTGGCTGGCCGAGGTGGTGCGCTGGACCTGGAAGGTCAAGCTGTACAACCACCTGGAAACCGACCTGCTCGGCG AGCTGCGCGAGAAGGCCGAGGACGAGGCAATCAGCGTGTTCGCCCGTAACCTGCACGACCTGCTGCTGGCCGCTCCGGCT GGCCCGCGCGCCACCCTGGCGCTCGACCCGGGTCTGCGCACCGGCTGCAAGGTGGCGGTGGTCGATGCCACCGGCAAGGT GCTGGAAACCGCCACCGTCTACCCGCACGCCCCGCGCAACGACTGGGACGGCACCCTGGCGATCCTCGCCAAGCTGTGCG CCAAGCACGGCGTCGACCTGATTTCCATCGGCAACGGCACCGCCAGCCGCGAAACCGACAAGCTGGCGGCCGAGCTGATC AAGAAGGTGCCGGGTCTGAAGCTGACCAAGGTGATGGTCTCCGAGGCCGGCGCCTCGGTGTACTCGGCCTCGGAACTGGC CGCCCGCGAATTCCCCGATCTGGACGTGTCGCTGCGCGGTGCCGTCTCCATTGCCCGCCGCCTGCAGGATCCGCTGGCCG AGCTGGTGAAAATCGACCCGAAATCCATCGGCGTCGGTCAGTACCAACACGATGTGTCGCAGCTCAAGCTGGCACGCAGC CTGGACGCCGTGGTCGAGGACTGCGTGAACGCCGTCGGCGTGGACGTGAATACCGCCTCCGCCGCCCTGCTGGCGCGCAT CTCCGGCCTCAACGCGACCTTGGCGCAGAACATCGTGCAGTACCGCGATGCCAACGGCGCCTTCGCCTCGCGCGCCGAAC TGAAAAAAGTGCCGCGCCTGGGCGAGAAGACCTTCGAGCAGGCCGCCGGCTTCCTCCGCGTAATGAACGGCGACAACCCG CTGGATGCCTCCGCGGTGCACCCGGAAACCTACCCGCTGGTCGAGCGCATCGCCCAGGACACCGGCCGCGACATCCGCTC GCTGATCGGCGACTCGGCGTTCCTCAAGCGCCTCGATCCGGCCAAGTTCACCGACGAGCGCTTCGGCCTAGTTACTGTCG GCGACATCCTCAAGGAACTCGACAAACCCGGCCGCGACCCGCGCCCGGAGTTCAAGACCGCCGAGTTCCAGGAAGGTGTG GAAACGCTCAATGACCTCAAGCTGGGCATGGTGCTCGAAGGCGTGGTGACCAACGTCACCAACTTCGGCGCCTTCGTCGA CATCGGCGTGCATCAGGACGGTCTGGTGCACATCAGCGCACTGTCGGAAAAGTTCATCAAGGACCCGCACGAAGCGGTCA AGGCCGGCGACGTGGTCAAGGTCAAGGTGATGGAAGTGGATATCCCGCGTAACCGCATCGCCCTGTCCATGCGCATGGGC GACACCCCCGGCGAGAAAGTCGAGGGCGCCCGTGGCGGTCAGTCGCGCGGCAACGGTAACCGCGGCGGCAACACACCGCG CAGCGAGCGCTACTCCAGCCAGGACAAACCGGCTCCCGCCACTGGCGGCATGGCCGCCCTGTTCGCCAACGCCAAGCAGT TGAAGAAATGA Protein sequence : MDSINNRIADELGVRPQQVAAAVALLDEGSTVPFIARYRKEVTGSLDDTQLRHLEERLRYLRELDERRVAILASIEEQGK LTPELKREIDLADTKTRLEDLYLPYKQKRRTKGQIALEAGLGELADALFNDPSLTPEQEAERFIDADKGFADVKAVLEGA KYILMERFAEDAALLDKLRSFLKDNATLSARLVPGKENEGAKFSDYFEHDEALKGVPSHRALAIFRGRNEGILSASLKVG EELPGTLHPCELMIGERFGLENKGRAADKWLAEVVRWTWKVKLYNHLETDLLGELREKAEDEAISVFARNLHDLLLAAPA GPRATLALDPGLRTGCKVAVVDATGKVLETATVYPHAPRNDWDGTLAILAKLCAKHGVDLISIGNGTASRETDKLAAELI KKVPGLKLTKVMVSEAGASVYSASELAAREFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARS LDAVVEDCVNAVGVDVNTASAALLARISGLNATLAQNIVQYRDANGAFASRAELKKVPRLGEKTFEQAAGFLRVMNGDNP LDASAVHPETYPLVERIAQDTGRDIRSLIGDSAFLKRLDPAKFTDERFGLVTVGDILKELDKPGRDPRPEFKTAEFQEGV ETLNDLKLGMVLEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFIKDPHEAVKAGDVVKVKVMEVDIPRNRIALSMRMG DTPGEKVEGARGGQSRGNGNRGGNTPRSERYSSQDKPAPATGGMAALFANAKQLKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 61 |
