Gene Information

Name : MDS_0339 (MDS_0339)
Accession : YP_004378122.1
Strain : Pseudomonas mendocina NK-01
Genome accession: NC_015410
Putative virulence/resistance : Virulence
Product : two component response regulator AlgR
Function : -
COG functional category : K : Transcription
COG ID : COG3279
EC number : -
Position : 357110 - 357856 bp
Length : 747 bp
Strand : +
Note : -

DNA sequence : 
ATGAATGTCCTGATCGTCGATGACGAACCCCTTGCCCGCGAGCGCCTGAGCCGCATGGTCGGTGAGCTCGAGGGTTACCG
GGTCCTGGAGCCCGCCGCCAGCAATGGCGAGGAGGCCCTGACCCTGATCGATAGCCTCAAGCCGGATGTGGTCCTGCTGG
ATATCCGCATGCCTGGCCTCGACGGCTTGCAGGTCGCTGCCAAGTTGTGTGAGCGCGAAGCACCGCCTGCGGTGATCTTC
TGCACGGCGCATGACGAGTTCGCCCTGGAGGCCTTTCAGGTCAGTGCCGTTGGTTATCTGGTCAAACCCGTACGCCCCGA
AAGCCTCAGCGAAGCCTTGAAAAAGGCCGAGCGGCCCAATCGCGTGCAACTGGCCGCCCTGACTCGCCCAGCCGCCGAGA
CAGGAGGTGGTCCGCGAACCCATATCAGCGCCCGTACCCGCAAGGGCATCGAGCTGATTCCGTTGGATCACGTGGTTTAT
TTCATTGCCGATCACAAGTACGTCACCTTGCGTCACGAGGGCGGCGAAGTGCTGCTGGATGAGCCGCTCAAGGCGCTGGA
AGACGAGTTTGGTGACCGCTTCGTGCGCATCCACCGCAATGCGCTGGTAGCGCGCGAGCGCATTGAACGTCTGCAGCGCA
CGCCGCTCGGGCATTTCCAGCTGTTCCTCAAAGGGCTGGAGGGTGATTCGCTGGTGGTCAGCCGGCGTCATGTCGCTGGC
GTGCGCAAGTTGATGCAGTCACTCTGA

Protein sequence : 
MNVLIVDDEPLARERLSRMVGELEGYRVLEPAASNGEEALTLIDSLKPDVVLLDIRMPGLDGLQVAAKLCEREAPPAVIF
CTAHDEFALEAFQVSAVGYLVKPVRPESLSEALKKAERPNRVQLAALTRPAAETGGGPRTHISARTRKGIELIPLDHVVY
FIADHKYVTLRHEGGEVLLDEPLKALEDEFGDRFVRIHRNALVARERIERLQRTPLGHFQLFLKGLEGDSLVVSRRHVAG
VRKLMQSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 3e-51 46
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 3e-51 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MDS_0339 YP_004378122.1 two component response regulator AlgR VFG0119 Protein 2e-107 88