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Name : MDS_3295 (MDS_3295) Accession : YP_004381078.1 Strain : Pseudomonas mendocina NK-01 Genome accession: NC_015410 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 3644265 - 3646832 bp Length : 2568 bp Strand : + Note : - DNA sequence : ATGACCGATCTCTCCGCACACACCCCGATGATGCAGCAGTACTGGAAGCTGAAGAACCAGCACCCGGACCAGTTGATGTT CTATCGCATGGGTGACTTCTACGAGATTTTCTACGAGGACGCGAAGAAGGCAGCCAAGCTGCTGGACATCACCCTGACCG CTCGCGGTCAGTCGGCTGGCCAGTCGATCCCTATGTGCGGCATTCCCTTCCATTCGGTCGAGGGTTACCTGGCTAAACTG GTCAAACTCGGTGAATCGGTAGTGATCTGCGAGCAGATCGGCGACCCAGCCACCAGCAAGGGGCCGGTGGAGCGCCAGGT GGTGCGCATCATCACGCCTGGCACCATCAGCGACGAAGCCTTGCTCGACGAACATCGCGACAACCTGTTGGCTGCCGTCC TCGGTGACGAACGTCTGTTCGGCCTGGCCGTGCTGGATATCACCAGTGGCCGCTTCAGCGTGCAGGAAATCAACGGCTGG GAGAACCTGCTGGCCGAACTGGAGCGCCTGAACCCCGCCGAGCTGCTGATTCCGGACGACTGGCCGCAAGGTCTGCCGGC CGAGAAACGCAAAGGCTCACGCCGCCGCGCGCCATGGGACTTCGATCGCGACAGTGCCTTCAAGAGCCTATGTCAGCAAT TCGGTACCCAGGATCTGAAAGGCTTTGGCTGCGAGAACCTGACTCTGGCCATCGGCGCCGCTGGCTGCCTGCTGAGCTAT GCCAAGGAAACCCAGCGTACCGCCCTGCCCCACCTGCGCAGCCTGCGCCACGAGCGCCTGGACGATACGGTGATCCTCGA CGGCGCCAGCCGCCGCAACCTGGAACTGGACATCAACCTCGCCGGTGGTCGCGACAACACCCTGCAGTCGGTCATGGATC GCTGCCAGACCGCCATGGCCAGCCGCCTGCTGGGCCGCTGGCTGAACCGTCCGCTGCGCGACCGTGCAGTGCTGGAGGCG CGCCAGGATGCCATCGCCTGCCTGCTCGATGGCTACCGTTTCGAAACACTGCAGCCGCAGCTCAAGGAAATCGGCGATCT GGAGCGCATCCTCGCCCGTATCGGCCTGCGCAATGCCCGTCCACGCGACCTGGCTCGCCTGCGCGATGCCCTGGCCGCAC TGCCCGAGCTGCAGCAGGAAATGGCTTCGCTGGACACGCCGCACCTGCAACAGCTGGCCACGACCATCGCCACCTACCCG GAACTGGCCGAGCTGCTGGCCCGCGCCATCATCGACAACCCGCCGGCGGTGATTCGCGACGGCGGCGTGCTGAAGACCGG CTACGACGCCGAGTTGGACGAGCTGCAGGCGATGAGCGAGAACGCCGGCCAGTTCCTCATGGATCTGGAGGCCCGCGAAA AAGCCCGCACCGGCCTAGCCAACCTCAAGGTGGGCTACAACCGTGTGCACGGTTACTTCATCGAGCTGCCGACCAAGCAG GCCGAATCTGCACCGGCCGATTACATCCGCCGGCAGACGCTCAAGGGCGCCGAGCGCTTCATTACCCCGGAGCTCAAGGA ATTCGAAGACAAGGCGTTGTCCGCCAAGAGCCGCGCCCTGGCGCGCGAGAAGATGCTCTACGACGAGTTGCTCGAGAAGC TGATCGGTCACCTGGCGCCGCTGCAGGACAGCGCCGCGGCCCTGGCCGAGCTGGATGTACTGAGCAATCTGGCCGAACGC GCACTCAACCTCGACCTGAACCGCCCACGCTTCGTCGATGAACCGTGCATGCGCATCAATCAGGGTCGTCACCCGGTGGT CGAGCAAGTGCTGACCACCCCCTTCGTGGCCAACGACCTTGATCTCGACGACCACCGCCGCATGTTGATCATCACTGGGC CGAACATGGGCGGTAAATCCACCTACATGCGCCAGACCGCCCTGATCGTACTGCTGGCCCATATCGGCAGCTTCGTGCCG GCCGCCGCCTGCGAGCTGTCGCTGGTCGATCGCATCTTCACCCGAATTGGCTCGAGCGATGATCTGGCTGGCGGCCGCTC CACCTTCATGGTGGAGATGAGCGAAACCGCCAACATCCTGCACAATGCCAGCGAACGCAGCCTGGTGCTGATGGACGAAG TCGGCCGTGGCACCAGTACCTTCGATGGCCTGTCGCTGGCCTGGTCGGCGGCCGAGCACCTGGCGCGCCTGCGTGCCTTC ACCCTGTTCGCCACTCACTACTTCGAACTGACGGTATTGCCTGAAAGTGAGCCAGTGGTGGCCAACGTGCACCTCTCGGC CACCGAGCACAACGAACGCATCGTTTTCCTCCATCATGTGCAGCCCGGACCGGCGAGCCAGAGCTACGGCCTGGCGGTGG CACAACTGGCGGGCGTGCCGGGCACAGTGATCAGCCGCGCGCGCGAGCACCTGGCGCGCCTGGAAGCCACCAGCCTGCCG CACGATCTTCCACGCCAGGAGCCCGGCCAACCTCAGGTCCCGATGCAAAGCGACCTGTTCGCCAGCGTGCCGCATCCACT GATAGAACAACTGCACAAGATCAATCCGGATGATCTGACGCCACGCAAGGCCCTCGAGCTGTTATATGCATGGAAGACGC AGGTCTAA Protein sequence : MTDLSAHTPMMQQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPFHSVEGYLAKL VKLGESVVICEQIGDPATSKGPVERQVVRIITPGTISDEALLDEHRDNLLAAVLGDERLFGLAVLDITSGRFSVQEINGW ENLLAELERLNPAELLIPDDWPQGLPAEKRKGSRRRAPWDFDRDSAFKSLCQQFGTQDLKGFGCENLTLAIGAAGCLLSY AKETQRTALPHLRSLRHERLDDTVILDGASRRNLELDINLAGGRDNTLQSVMDRCQTAMASRLLGRWLNRPLRDRAVLEA RQDAIACLLDGYRFETLQPQLKEIGDLERILARIGLRNARPRDLARLRDALAALPELQQEMASLDTPHLQQLATTIATYP ELAELLARAIIDNPPAVIRDGGVLKTGYDAELDELQAMSENAGQFLMDLEAREKARTGLANLKVGYNRVHGYFIELPTKQ AESAPADYIRRQTLKGAERFITPELKEFEDKALSAKSRALAREKMLYDELLEKLIGHLAPLQDSAAALAELDVLSNLAER ALNLDLNRPRFVDEPCMRINQGRHPVVEQVLTTPFVANDLDLDDHRRMLIITGPNMGGKSTYMRQTALIVLLAHIGSFVP AAACELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETANILHNASERSLVLMDEVGRGTSTFDGLSLAWSAAEHLARLRAF TLFATHYFELTVLPESEPVVANVHLSATEHNERIVFLHHVQPGPASQSYGLAVAQLAGVPGTVISRAREHLARLEATSLP HDLPRQEPGQPQVPMQSDLFASVPHPLIEQLHKINPDDLTPRKALELLYAWKTQV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| MDS_3295 | YP_004381078.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 61 |
