|
Name : MDS_3050 (MDS_3050) Accession : YP_004380833.1 Strain : Pseudomonas mendocina NK-01 Genome accession: NC_015410 Putative virulence/resistance : Unknown Product : methyl-accepting chemotaxis sensory transducer Function : - COG functional category : N : Cell motility COG ID : COG0840 EC number : - Position : 3371757 - 3373322 bp Length : 1566 bp Strand : - Note : - DNA sequence : ATGCGCCAGAACCTGCCCGTGACTCAGCGGGAAAGAACCTTCCCCGCGGAAGAACGCCTGATTTCCACCACCGACCTCAA CAGCAAGATCACCTACTGCAACGATGCTTTTGTCGAGATCAGCGGTTTCACCCGCGAGGAGTTGATCGGCCAGCCGCATA ACCTCGTACGACACCCGGACATGCCCCCTGCGGTGTTTGGCCATATGTGGGAGACGATCAAGCAGGGCAAGCCCTGGATG GGGATCGTCAAGAATCGTTCGAAGAACGGTGACTTCTACTGGGTCAGTGCCTATGTCACACCGGTCTATGAGAACGGTCG CATCGCCGGCTACGAGTCGGTGCGCTCCCTGCCGACGGAGGCGCAGAAGCGGCGTGCCGAGACGCTTTATGCTCGTCTGC GAGCGGGCAAGTCGCCGGTGCCGAAGCTCGAGTACTGGACTTATGATCTGGTGCGCTCCTGGCCATTGATTGCAGCGTCA TTACTGATCGTTGCGGCGCACTGGCTGATCTCGGGCTGGCCGCTGATGGTGTTCATCCTGCTGACGCTGTTCGCCCTTGG GTCTTATCAGCTGTACCGCACTCGCCAGCTCATTCGTCGGACCTTGGCCGAGCATCCGAAAGCCTTCACCAGCGGCCTCG TGGCGCTGACCTACAGCGATAATCGCGGTGCCCAGGCGTTGCTGGACATGGCGATGATCAGCGAGGAGGCCCGTTTGCAG ACGGCGCTGACGCGGCTGGAAGATGCCGGCGAGAACGTCAAGAAGCGCGCCACCCAGTCTGCAGAATTGTCGCGCTCTGG CGCGCAGTTGCTTGACCAGCAGCGGGCAGAAACCGACCAGTCGGCGACAGCCATCAACCAGATGGCGGCGACCATTCAGG AGGTCGCACACAACGTACAGAACACCTCGCATGCCGCCGAGGAGGCGGATCGCCTGGCGCGGGAAGGGCGTGACCTCGCC GTGGGGAGTCTCGATTCCATGCGACAGATGGCCAAGGCCGTCAACGATATCGGGCAGGCCGTCAACGAGTTGGCCAATTC CACCCAGTCCATCGGCAGTGTGGCCGATGTAATCACCTCGATTGCCGAGCAGACCAACCTGCTGGCGCTCAATGCTGCTA TCGAGGCGGCGCGCGCAGGTGAGCAGGGTCGTGGTTTCGCCGTCGTGGCCGATGAGGTCCGGTCGCTGGCTTCGCGCACG CGTCAGTCCACCGAGCAGATCCACCAGATCATCTCCGACTTGCGTGCCGGGGCCGAGCGTGCCGTGTTGACGGCAGGCAA GGGCGAGGAAATCTCCCGCGGCAGCGTGCAGAGTGTGGAGTCGGTGCGTGATGCGCTGGAGGGCATCAGCTCGGCGGTAA CTCGCATTACCGGCATGAGTCAGCAAATGGCTGCGGCTTCCGAAGAGCAGAGCCATGTGGCGGACGATATCAGCCGGCAG ATCACTCGTATCGCTCAGCTTTCCGACCACAGTGCCGGCCAGGCGCATCAGGGCGCGGCCATCAGCCGTGAACTGGAGGA AATGGCCGACTACCTGCACAGCCTGGCAGAGCGTTTCAATCGCTGA Protein sequence : MRQNLPVTQRERTFPAEERLISTTDLNSKITYCNDAFVEISGFTREELIGQPHNLVRHPDMPPAVFGHMWETIKQGKPWM GIVKNRSKNGDFYWVSAYVTPVYENGRIAGYESVRSLPTEAQKRRAETLYARLRAGKSPVPKLEYWTYDLVRSWPLIAAS LLIVAAHWLISGWPLMVFILLTLFALGSYQLYRTRQLIRRTLAEHPKAFTSGLVALTYSDNRGAQALLDMAMISEEARLQ TALTRLEDAGENVKKRATQSAELSRSGAQLLDQQRAETDQSATAINQMAATIQEVAHNVQNTSHAAEEADRLAREGRDLA VGSLDSMRQMAKAVNDIGQAVNELANSTQSIGSVADVITSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRT RQSTEQIHQIISDLRAGAERAVLTAGKGEEISRGSVQSVESVRDALEGISSAVTRITGMSQQMAAASEEQSHVADDISRQ ITRIAQLSDHSAGQAHQGAAISRELEEMADYLHSLAERFNR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0512 | NP_230163.1 | methyl-accepting chemotaxis protein | Not tested | VSP-2 | Protein | 2e-76 | 42 |
