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Name : MDS_0285 (MDS_0285) Accession : YP_004378068.1 Strain : Pseudomonas mendocina NK-01 Genome accession: NC_015410 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase I Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 301972 - 303423 bp Length : 1452 bp Strand : + Note : - DNA sequence : ATGCAACTGAAAGACCCCCAGCTGCTGCGCCAACAGGCTTATATCGATGGCCAGTGGCTGGACGCCGACAGCGGTCAGAC CATCGCCGTGAACAACCCGGCGACTGGCGAGATCATCGGTCACGTTCCGAAGATGGGCCGAGCGGAAACTCGCCGTGCCA TTGAGGCCGCCGAGAAGGCGCTGCCGGCCTGGCGTGCGCTGACTGCCAAGGAGCGCGCGAACAAGCTGCGCCGCTGGTTC GAGTTGCTGATGGAGAATCAGGATGATCTTGGTCGCCTGATGACCCTGGAGCAGGGCAAGCCGCTGGCCGAAGCCAAGGG CGAGATCGCCTACGCGGCCTCCTTCATCGAGTGGTTCGCCGAGGAAGCCAAGCGCGTCTACGGTGACGTGATCCCCGGCC ACCAGCCGGACAAGCGCCTGATCGTGATCAAGCAGCCGATCGGCGTCACCGCCGCCATCACCCCGTGGAACTTCCCTGCG GCGATGATCACCCGCAAGGCCGGCCCGGCACTGGCTGCCGGTTGCACCATGGTGATCAAGCCGGCTTCGCAGACCCCGTT CTCCGCCCTGGCCCTGGTCGAGCTGGCCGAGCGTGCCGGCATCCCGAAAGGCGTGCTGAGCGTGGTCACCGGCAGCGCCG GCGAAGTGGGTGGCGAGCTGACCAGCAACCCCATCGTGCGCAAGCTGTCCTTCACTGGCTCGACCGAAATCGGTCGCCAA CTGATGGCCGAGTGCGCGCAGGACATCAAGAAGGTGTCGCTGGAGCTGGGCGGCAACGCGCCGTTCATCGTCTTCGATGA CGCCGATCTGGATGCCGCCGTCGAAGGCGCGCTGATCTCCAAGTACCGCAACAACGGCCAGACCTGCGTCTGCGCCAACC GCATCTACGTGCAGGACGGTGTCTACGATGCCTTCGCTGAGAAGCTGATTGCCGCCGTGGGCAAGCTGAAGATCGGTAAC GGTCTGGAAGACGGCACCACCACCGGCCCGCTGATCGACGAGAAGGCCGTGGCCAAGGTGCAGGAGCACATCGCCGACGC GGTGAACAAGGGCGCCAAGCTGGCCCTGGGCGGCAAGCCGCATGCCCTCGGTGGCACCTTCTTCGAACCGACCATCCTGG TAGACGTGCCGAAAACCGCTGCCGTGGCCAAGGAAGAAACCTTCGGCCCGCTGGCGCCGCTGTTCCGCTTCAAGGACGAG GCCGAGGTGATCGCCATGGCCAACGATACCGAGTTCGGCCTGGCCTCCTACTTCTATGCCCGTGACCTGGGCCGCGTGTT CCGCGTGGCCGAGGCGCTGGAGTACGGCATGGTGGGTATCAATACCGGCCTGATCTCCAACGAAGTCGCGCCGTTCGGCG GCGTGAAGGCTTCCGGCCTGGGCCGCGAAGGCTCCAAGTACGGCATCGAGGACTATCTCGAGATCAAGTACATGTGCCTG GGCGGCATCTAG Protein sequence : MQLKDPQLLRQQAYIDGQWLDADSGQTIAVNNPATGEIIGHVPKMGRAETRRAIEAAEKALPAWRALTAKERANKLRRWF ELLMENQDDLGRLMTLEQGKPLAEAKGEIAYAASFIEWFAEEAKRVYGDVIPGHQPDKRLIVIKQPIGVTAAITPWNFPA AMITRKAGPALAAGCTMVIKPASQTPFSALALVELAERAGIPKGVLSVVTGSAGEVGGELTSNPIVRKLSFTGSTEIGRQ LMAECAQDIKKVSLELGGNAPFIVFDDADLDAAVEGALISKYRNNGQTCVCANRIYVQDGVYDAFAEKLIAAVGKLKIGN GLEDGTTTGPLIDEKAVAKVQEHIADAVNKGAKLALGGKPHALGGTFFEPTILVDVPKTAAVAKEETFGPLAPLFRFKDE AEVIAMANDTEFGLASYFYARDLGRVFRVAEALEYGMVGINTGLISNEVAPFGGVKASGLGREGSKYGIEDYLEIKYMCL GGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-163 | 69 |
