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Name : MDS_0028 (MDS_0028) Accession : YP_004377811.1 Strain : Pseudomonas mendocina NK-01 Genome accession: NC_015410 Putative virulence/resistance : Virulence Product : chaperone Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 33583 - 36255 bp Length : 2673 bp Strand : + Note : - DNA sequence : ATGGGTGAAATCAGTCGTACCGCGCTGTTCGGCAAGCTCAACAGCGTCGGCTACAAGGCCATCGAGGCCGCCACCGTGTT CTGCAAGCTGCGCGGCAATCCCTACGTCGAGTTGGCGCACTGGTTGCACCAGCTCCTGCAACTGCAGGACTCCGACCTGC ACCGCATCATCCGCCAGTTCAGCCTGGAGCCGGCGCGCCTGGCGCGTGACCTGACCGACGCACTCGACCGCCTGCCGCGC GGCTCGACCTCGATCACCGACCTGTCCTCGCACGTCGAGGAAGCGGTCGAGCGTGGCTGGGTCTACGGCAGCCTGATGTT CGGCGAGCACCAGGTGCGCACCGGCTACCTGATCATCGGCATCCTCAAGACGCCGAGCCTGCGCCAGGTGCTGCTGGGCC TGTCGGGCGAGTTCGCCAAGATCAAGGTGGAGACCCTCAGCGAGCGCTTCGACGAATACGTCGGCGATTCGCCGGAGAAC AACCTGGCCGCCAACGACGGTTTCGCCGCCGCTGCCCCGGGCGAGGCCAGTGGCGCCATGGCGCCAGCGGCGATGGGCAA GCAGGAGGCGCTCAAGCGCTTCACCATCGACCTCACCGAGCAGGCGCGCAAGGGCGAGCTGGACCCCATCGTCGGCCGCG ATGAGGAGATCCGCCAACTGGTCGACATCCTCATGCGCCGCCGCCAGAACAACCCGATCCTCACCGGTGAAGCCGGCGTC GGCAAGACCGCCGTGGTCGAGGGTTTCGCCCTGCGCATCGCCGCCGGTGACGTGCCGCCCTCGCTCAAGGATGTGGAGCT GCGCAGCCTGGATGTCGGCCTGCTGCAGGCCGGCGCCAGCATGAAAGGCGAGTTCGAGCAGCGCCTGCGTCAGGTCATCG AAGACGTGCAGGCCTCGCCCAAGCCGATCATCCTGTTCATCGACGAAGCCCACACCCTGGTCGGCGCTGGTGGTGCGGCC GGTACTGGCGACGCGGCCAACCTGCTCAAGCCGGCGCTGGCGCGCGGCAGCCTACGCACCGTCGCCGCCACTACCTGGGC CGAGTACAAGAAGCATATCGAGAAGGACCCGGCGCTGACTCGTCGCTTCCAGGTGGTGCAGGTGCCCGAGCCGTCCGAGG ACAAGGCGCTGTTGATGATGCGCGGCGTGGCCTCGACCATGGAGAAACACCACCAGGTGCAGATTCTCGACGAGGCCCTG GACGCTGCGGTCAAGCTCTCGCACCGCTACATCCCGGCGCGCCAGCTGCCGGACAAGTCGGTCAGCCTGCTCGATACCGC CTGCGCCCGTGTGGCCATCAGCCTGCACGCCGTACCGGCCGAGATCGACGACAGCCGCCGGCGCATCGAAGCGCTGGAAA CCGAACTGCAGATCATCGCCCGCGAGCACGCCATCGGCATCGACGTCAGCCTGCGTCAGGCCAACAGCGAGAGCCTGCTA GCCGCCGAACGCGAGCGCCTGGCCGAGCTGGAAAGCCGCTGGGCCGAAGAGAAGCAGCTGGTCGATGAACTGCTGGCCAC CCGCGCCAGCCTGCGCGAAAGCGCTGGGGTGGTCGATCAGGACAGCGGCACCGATCACCAGGCCCTGCGCGCGCGGCTGG TCGAATTGCAGCAGCGCCTGAGCCAGTTGCAGGGCGAAGCCCCGCTGATCCTGCCAACCGTCGATTACCAGGCCGTGGCC TCGGTGGTGGCGGACTGGACCGGCATCCCGGTCGGACGCATGGCGCGCAACGAGGTCGAGACCGTGCTCAACCTCGATAG CCTGCTGGGCAAGCGCATCATCGGCCAGGATCACGCGCTGAAGATGATCGCCAAGCGCATCCAGACCTCCCGCGCCGGCC TCGACAACCCCAACAAGCCGATTGGTGTGTTCATGCTCGCCGGCACCTCCGGCGTCGGTAAGACCGAGACCGCGCTGGCG CTGGCCGAGGCGCTGTATGGCGGTGAGCAGAACCTGATCACCATCAACATGAGCGAATTCCAGGAGGCGCACACCGTCTC CACCCTCAAGGGTGCGCCGCCCGGCTATGTCGGCTACGGCGAAGGCGGCGTGCTGACCGAGGCGGTGCGCCGCCGGCCGT ACAGTGTGGTGCTGCTCGACGAGGTGGAAAAGGCTCACCCGGACGTGCACGAGATCTTCTTCCAGGTGTTCGACAAGGGC GTGATGGAAGACGGCGAAGGGCGTCTGATCGACTTCAAGAACACCCTGATCCTGCTCACCACCAACGCCGGCACCGAACA GGTGGCGCGCCTGTGCCAGGACGCGGACAACCTGCCCGACCCGGAAAGCATCGCCCGCGACCTGCGTCAGCCGCTGCTGG AGATCTTCCCGCCGGCGCTGCTCGGCCGTCTGGTGACCATCCCCTATTACCCACTCAGCGACACCATGCTCAAGGCCATC ACCCGCCTGCAGCTGGGGCGCATCAAGAAGCGCATCGAAAGCACCCACAAGGTGCCCTTCGACTACGACGAGGCGGTGGT CGACCTGGTGGTTTCGCGCTGCACCGAGAGCGAGAGTGGCGGCCGGCAGATCGACGCCATTCTCACCAACGGCATGCTGC CGGACATGAGCCGCGAGTTCCTCACCCGCATGATGGAAGGCAAGCCGCTGGCCGGTGTGCGCGTCAGTGTGGCCGACAAC GACCTGAACTACAGCTTCGCCGACAACGCCTGA Protein sequence : MGEISRTALFGKLNSVGYKAIEAATVFCKLRGNPYVELAHWLHQLLQLQDSDLHRIIRQFSLEPARLARDLTDALDRLPR GSTSITDLSSHVEEAVERGWVYGSLMFGEHQVRTGYLIIGILKTPSLRQVLLGLSGEFAKIKVETLSERFDEYVGDSPEN NLAANDGFAAAAPGEASGAMAPAAMGKQEALKRFTIDLTEQARKGELDPIVGRDEEIRQLVDILMRRRQNNPILTGEAGV GKTAVVEGFALRIAAGDVPPSLKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQASPKPIILFIDEAHTLVGAGGAA GTGDAANLLKPALARGSLRTVAATTWAEYKKHIEKDPALTRRFQVVQVPEPSEDKALLMMRGVASTMEKHHQVQILDEAL DAAVKLSHRYIPARQLPDKSVSLLDTACARVAISLHAVPAEIDDSRRRIEALETELQIIAREHAIGIDVSLRQANSESLL AAERERLAELESRWAEEKQLVDELLATRASLRESAGVVDQDSGTDHQALRARLVELQQRLSQLQGEAPLILPTVDYQAVA SVVADWTGIPVGRMARNEVETVLNLDSLLGKRIIGQDHALKMIAKRIQTSRAGLDNPNKPIGVFMLAGTSGVGKTETALA LAEALYGGEQNLITINMSEFQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEVEKAHPDVHEIFFQVFDKG VMEDGEGRLIDFKNTLILLTTNAGTEQVARLCQDADNLPDPESIARDLRQPLLEIFPPALLGRLVTIPYYPLSDTMLKAI TRLQLGRIKKRIESTHKVPFDYDEAVVDLVVSRCTESESGGRQIDAILTNGMLPDMSREFLTRMMEGKPLAGVRVSVADN DLNYSFADNA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 0.0 | 52 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 4e-123 | 46 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 5e-123 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| MDS_0028 | YP_004377811.1 | chaperone | VFG2076 | Protein | 0.0 | 85 |
| MDS_0028 | YP_004377811.1 | chaperone | VFG2084 | Protein | 6e-135 | 46 |
