Gene Information

Name : MDS_2761 (MDS_2761)
Accession : YP_004380544.1
Strain : Pseudomonas mendocina NK-01
Genome accession: NC_015410
Putative virulence/resistance : Unknown
Product : Na+/H+ antiporter NhaC
Function : -
COG functional category : R : General function prediction only
COG ID : COG2056
EC number : -
Position : 3030428 - 3031747 bp
Length : 1320 bp
Strand : -
Note : -

DNA sequence :
ATGAACGCTGTAATCGCCGCGGTCGGCATCATGCTGGTCCTCAGTCTCTGTCGCGTACACGTGGTCGTGGCTCTGATCAT
CGGCGCGCTGGCCGGCGGCCTGTTGGGTGGCTTGGGTGTCGAAGGCACGCTGAAGGCGTTCAACCAGGGGCTGGGTGGCG
GGGCGACGGTTGCGCTGTCCTACGCACTGCTCGGTGCTTTCGCCGTGGCCATCGCCAAATCCGGCCTCGCGCATGCCTTG
GCGGATCGCGCGCTGGCGCTGGTCGACAAGCAGCAGGAAGGTGCGGGCGGTGCGTTGAAATGGCTGCTGATCGCGTTGCT
GCTGGCGGTCGCTATCTCCTCGCAGAACCTGCTGCCGATTCACATCGCCTTCATTCCGTTGCTGGTACCGCCGCTGTTGT
ACGTGTTGAGCAAGCTGCAGCTGGATCGCCGTCTGATCGCCTGTGTGCTGACCTTCGGCCTGATCACGCCGTACATGTTC
CTGCCGGTTGGCTTTGGCGGCATCTTCCTCAACGAGATCCTGCTGGCCAACGTCGCCAAGTCCGGTGTCGATGTCACTGG
CATCAGCATCACCCAAGCCATGGCCATCCCGGCGCTGGGTATGCTCTTCGGCCTGCTCGTGGCAGTGTTTTTCAGCTATC
GCGGCAAGCGCGTGTATGACCTGGAAAAGGTGGCGCAGACCGAGCGCGTGGATGCCCAGTACAACCCGCTGAGCCTACTG
GTTGCGGGGCTGGCCATTGCCGCTGCGTTCGTCGTGCAGCTGTGGCTGGATTCGATGATCATCGGCGCGCTGGTCGGCTT
CGTGATCTTCTCGGTTTCCGGTGTGGTGCGCTGGAAAGAGGCGGACGGCCTGTTCACCGAAGGCATGAAGATGATGGCCA
TGATCGGCTTCATCATGATCGCCGCCGCCGGCTTCGCCGAGGTCATGAAGACCACCGGTGAGGTGAAGACCCTGGTCGAC
AGCTCGGCAGCGTTGATCGGTCACAACAAGGCGGTCGGTGCGCTGCTGATGTTGCTGGTCGGGCTACTGGTGACCATGGG
CATTGGCTCATCCTTTTCCACTATCCCGATCATCGCCGCGATCTTCGTCCCGCTTGGCGTGCAACTGGGTTTCAGCCCGT
TGGCCATCGTCTGCATAGTCGGCACTGCCGGGGCGCTGGGTGATGCTGGTTCACCCGCTTCTGACTCGACGCTCGGGCCA
ACTTCGGGTTTGAACGCCGATGGCCAGCACAACCACATCTGGGACAGCGTGGTGCCCACCTTCCTGCACTACAACCTGCC
GCTGCTGGCGTTCGGTTGGGCGGCCGCTATGCTCCTGTGA

Protein sequence :
MNAVIAAVGIMLVLSLCRVHVVVALIIGALAGGLLGGLGVEGTLKAFNQGLGGGATVALSYALLGAFAVAIAKSGLAHAL
ADRALALVDKQQEGAGGALKWLLIALLLAVAISSQNLLPIHIAFIPLLVPPLLYVLSKLQLDRRLIACVLTFGLITPYMF
LPVGFGGIFLNEILLANVAKSGVDVTGISITQAMAIPALGMLFGLLVAVFFSYRGKRVYDLEKVAQTERVDAQYNPLSLL
VAGLAIAAAFVVQLWLDSMIIGALVGFVIFSVSGVVRWKEADGLFTEGMKMMAMIGFIMIAAAGFAEVMKTTGEVKTLVD
SSAALIGHNKAVGALLMLLVGLLVTMGIGSSFSTIPIIAAIFVPLGVQLGFSPLAIVCIVGTAGALGDAGSPASDSTLGP
TSGLNADGQHNHIWDSVVPTFLHYNLPLLAFGWAAAMLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1474 YP_005683838.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 1e-73 61
CpI19_1481 YP_005685924.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 1e-73 61
Cp1002_1472 YP_005681739.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 8e-74 61
cpfrc_01481 YP_003783881.1 hypothetical protein Not tested PiCp 5 Protein 8e-74 61
BJAB0868_00356 YP_008211682.1 putative permease Not tested AbaR26 Protein 2e-67 52
BJAB07104_00352 YP_008207817.1 putative permease Not tested AbaR25 Protein 2e-67 52