Gene Information

Name : MDS_0026 (MDS_0026)
Accession : YP_004377809.1
Strain : Pseudomonas mendocina NK-01
Genome accession: NC_015410
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3519
EC number : -
Position : 30715 - 32574 bp
Length : 1860 bp
Strand : +
Note : -

DNA sequence :
ATGAACCCCCGTTTGCTGGAGTTGTACAACCAGGAGCTGCAACACATCCGCGACGGCGCGGCCGAGTTCGCCCGCGAGTA
CCCGAAGATCGCCAGCCGCCTCAGCCTGTCCGGCCTGGAGTGCACCGACCCCTACGTCGAGCGCCTGCTCGAAGGCTTCG
CCTGGCTGACTGCGCGAGTACAGCTCAAGCTCGACGCCGAGTACCCGGTATTCACCCACAACCTGCTGGAAATCGCCTAC
CCGCACTACCTGGCGCCGACGCCGTCGATGACCGTGGTGCAGTTGCATACCGATGCCAACGATGGCGCGCTCAACGGCAG
CTTCAACCTGCCTCGCGACAGCGTGTTGCGCGCCACCCTCGGCAAGGACAGCCAGACCCCCTGCGAATACCGCACGGCTC
ACCCGGTAACCTTGTGGCCGCTACAGGTGGCGGAGGCCGAGTACATAAGCAACCCTTCCGCCGCGCTGGGTCGCCTGGCC
GCCAGCGAGCCGCGTGCCAAAGCTGCGCTGCGCATCACCCTGCGCAGTGGCGCTGAAATACCCTTCGCCAGCCTGGATCT
GGACAACCTGCCGCTGTACCTCAGCGGCCTCGACGAGCTGCCATTTCGTCTGTACGAGCAACTGCTGGGTAACCGCGTCG
CGGTGTTCGCCCGCCAGCCAGGGCGCGACTGGGTCGAACGCCTGCCGACCGACGCCTTGCGCCCGTGCGGTTTCGATGAT
GCCGAGGCGGCCCTGCCGGTGGTGCCGCAGGCCTTCCAGGGCTATCGCCTGCTGCAGGAGTATTTCGCCCTGCCGCAGCG
TTTTCTGTTCGTCGACTTCTGCAATCTGCGCCGTGCCGTGCGCCAGTGCAGCGGCAACGAGCTGGAGTTGATCGTGCTGT
TCGATCGCCTCGACAGCAACCTGCAGAATCAGGTAGATGCCAGCCAGTTCCTGCCGTTCTGCACTCCGGCGATCAACCTG
TTTCCGCGGCGCCTGGATCGCATCCACCTGAGCGACAAGGTGCACGAGCACCACGCCATTGCCGACCGCACACGGCCGAT
GGATTTCGAGATCCATTCGTTGCGCGGCGTCACCGGCCATGGCAGTGGCCCGGAGCAGACCTTCCTGCCCTTCTATGCCG
TGCGTGACCCCGCGCGTTATGGGCGCGATCAGGCCTACTACATCGTGCGCCGCGAACCGCGTGTACTGTCGGCCGGGCAG
CGCCGCAACGGCACGCGCTCCAGCTACGTGGGCAGCGAAACCTTCATCAGCCTGGTCGACAGCCACCAGGCGCCGTATCG
CCATGACCTGCGCCAGCTCGGCCTCAGCGCCCTGTGCACCAACCGCGACCTGCCGCTGTTCATGACCGTCGGCAGCGGCA
AGAGCGACTTTACCCTGGCCGACAGCGCGCCGGTGCAGAGCGTGCGCTGTGTGGCCGGGCCGAGCCGGCCGCGTGCCAGC
CCGGCCCATGACAACCAGGCCTGGCGCTTGATCAGCCAGCTGTCGCTGAACTACCTGTCGCTGGCCGAGCAGGGCCAGGG
CGCCGCTGCCCTGCGCGAGATGCTGCGCCTGTATGGCGACATACAGAATCCGGCGCTGCAACTGCAGATCGAAGGCCTGC
GCGACGTCAGCGCTAAACCCTGTACGCGGCGTTTGCCAATGCCCGGGCCAATCGTCTTTGGGCGTGGTCTGGAAATCACC
CTGGAATTCGACGAGAACGCCTTCCGCGGTACCGGGGTGTTTCTCCTCGGCGCGGTGTTCGAGCGTTTCCTGGCGCGTTA
CGTATCCCTCAACAGCTTTACCGAGACGGTGCTGCGCAGCACCGAGCGCGGCGAGATCATGCGATGGAAAGCCCGGCCCG
GCCGTCGTCCGAACCTCTAG

Protein sequence :
MNPRLLELYNQELQHIRDGAAEFAREYPKIASRLSLSGLECTDPYVERLLEGFAWLTARVQLKLDAEYPVFTHNLLEIAY
PHYLAPTPSMTVVQLHTDANDGALNGSFNLPRDSVLRATLGKDSQTPCEYRTAHPVTLWPLQVAEAEYISNPSAALGRLA
ASEPRAKAALRITLRSGAEIPFASLDLDNLPLYLSGLDELPFRLYEQLLGNRVAVFARQPGRDWVERLPTDALRPCGFDD
AEAALPVVPQAFQGYRLLQEYFALPQRFLFVDFCNLRRAVRQCSGNELELIVLFDRLDSNLQNQVDASQFLPFCTPAINL
FPRRLDRIHLSDKVHEHHAIADRTRPMDFEIHSLRGVTGHGSGPEQTFLPFYAVRDPARYGRDQAYYIVRREPRVLSAGQ
RRNGTRSSYVGSETFISLVDSHQAPYRHDLRQLGLSALCTNRDLPLFMTVGSGKSDFTLADSAPVQSVRCVAGPSRPRAS
PAHDNQAWRLISQLSLNYLSLAEQGQGAAALREMLRLYGDIQNPALQLQIEGLRDVSAKPCTRRLPMPGPIVFGRGLEIT
LEFDENAFRGTGVFLLGAVFERFLARYVSLNSFTETVLRSTERGEIMRWKARPGRRPNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0289 NP_454871.1 hypothetical protein Not tested SPI-6 Protein 6e-118 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MDS_0026 YP_004377809.1 hypothetical protein VFG2074 Protein 0.0 79