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Name : MDS_2386 (MDS_2386) Accession : YP_004380169.1 Strain : Pseudomonas mendocina NK-01 Genome accession: NC_015410 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 2610633 - 2611913 bp Length : 1281 bp Strand : + Note : - DNA sequence : ATGCTCGATTCCAAACTTGTCCGCACGCAACTCTCCGAAATCGCCGAGCGCCTCGCTACCCGCGGCTTCGCCCTCGATGT CGCTCGCTTCGAGGCCCTGGAGAGTCAGCGCAAGTCGGTGCAGGTACGCACCGAGCAGCTGCAGGCCGAGCGCAACAGCC GTTCCAAGTCCATCGGCCAGGCCAAGGCGCGCGGCGAAGACATCGCGCCCCTGCTGGCGGAAGTCGATCAGATGGGCAGC GATCTGGAAGCGGGCAAGCGTGAGCTGGATGCCATCCAGAACGAGCTGGACAACCTGCTGCTGAACATCCCCAACCTGCC GCACGAGTCGGTACCGGTCGGTGCCGACGAAGACGGCAACGTCGAGGTGGCGCGCTGGGGCGCCCCGCGCACCTTCGACT TCGAAATCAAGGACCATGTCGCCCTCGGCGAGCAGCATGGCTGGCTGGACTTCGAAACCGCTGCCAAGCTTTCCGGCGCG CGCTTCGCGTTGCTACGCGGCCCCATTGCGCGTCTGCATCGCGCCCTGGCGCAGTTCATGATCAACCTGCACACCGGTGA GCACGGCTACGAAGAGGCCTACACCCCTTATCTGGTGCAGGCTCCGGCACTGCAGGGCACCGGTCAGCTGCCGAAGTTCG AGGAAGACCTGTTCAAGATCCGCCGTGAGGACCAGGCCGATCTGTACCTGATCCCGACTGCCGAAGTCTCGCTGACCAAT ATCGTTGCTGGCGAAATTCTCGATGCCAAACAGCTGCCATTGAAGTTCGTCGCACACACACCGTGCTTCCGCAGTGAAGC AGGCGCTTCCGGCCGCGATACCCGTGGCATGATCCGCCAGCACCAATTCGACAAGGTCGAGATGGTGCAGATCGTCGAGC CCTCCAAGTCCTTCGAGGCGCTGGAAGGCATGACCGCCAACGCCGAGCGTGTTCTGCAACTGCTGGAATTGCCGTATCGC AAGTTGGCGCTGTGCACCGGCGACATGGGCTTCTCTGCGGTGAAAACCTACGACCTCGAAGTCTGGGTGCCGAGCCAGGA CAAGTACCGCGAGATTTCCTCCTGTTCCAACTGCGGCGACTTCCAGGCGCGCCGCATGCAGGCACGTTACCGCAACCCGG AAACCGGCAAACCCGAGCTGGTGCACACACTCAACGGTTCCGGTCTGGCGGTTGGTCGCACCCTGGTGGCGGTACTGGAG AACTACCAGCAGGCCGATGGCAGCATCCGCGTCCCCGAAGTGCTCAAACCCTACATGGGCGGCATCGAGGTGGTCGGCTA A Protein sequence : MLDSKLVRTQLSEIAERLATRGFALDVARFEALESQRKSVQVRTEQLQAERNSRSKSIGQAKARGEDIAPLLAEVDQMGS DLEAGKRELDAIQNELDNLLLNIPNLPHESVPVGADEDGNVEVARWGAPRTFDFEIKDHVALGEQHGWLDFETAAKLSGA RFALLRGPIARLHRALAQFMINLHTGEHGYEEAYTPYLVQAPALQGTGQLPKFEEDLFKIRREDQADLYLIPTAEVSLTN IVAGEILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVEPSKSFEALEGMTANAERVLQLLELPYR KLALCTGDMGFSAVKTYDLEVWVPSQDKYREISSCSNCGDFQARRMQARYRNPETGKPELVHTLNGSGLAVGRTLVAVLE NYQQADGSIRVPEVLKPYMGGIEVVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-105 | 55 |
