Gene Information

Name : MDS_2290 (MDS_2290)
Accession : YP_004380073.1
Strain : Pseudomonas mendocina NK-01
Genome accession: NC_015410
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2496867 - 2497550 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence : 
ATGCGCATTCTGGTCATCGAAGACAACCGAGACATTCTCGCCAACGTGCTCGACTACCTGCAGCTCAAGGGTTTTTCCGT
CGATTGCGCACAGGACGGCCTGAGCGGTCTGCACCTAGCCAGCAGCGGCCATTACGACCTGATCGTGCTGGACATCATGC
TACCCGGCATCGACGGCTATCAGGTGTGCAAACGCCTGCGCGAAGATGGTCGCAGCGAAGTACCGATCCTCATGCTGACT
GCGCGCGATGCGCTGGATGATCGCCTGAAGGGGCTCAATGCCGGCGCCGATGACTATCTGATCAAGCCCTTCGCGCTGTC
CGAACTGGTGGCGCGCATCGAGGCGATCCTGCGCCGCAGTCGCGGCAGTCGCAAACGCCAGCTGCAGGTCGCCGATCTCA
GCTACGACCTCGATACCCTGCACGTCAGCCGCGCCGGTCAATCGCTCAAGCTCAACCCGCTGGGCCTCAAACTGCTGGCT
ATCCTCATGCAGCGCAGCCCGGCAGTGGTGCGTCGCGAAGCGCTGGAAGAAGCCCTGTGGGGCGACGACTGCCCGGATAG
CGACAGCCTGCGCAGCCATGTCCACCAGTTACGCCAGGTGCTCGACAAACCCTTCCCCACGCCGCTGCTGCACACCATTC
ACGGTGTCGGTTATCGCCTGGCGGAGAGCGCCGATGCTGTCTAA

Protein sequence : 
MRILVIEDNRDILANVLDYLQLKGFSVDCAQDGLSGLHLASSGHYDLIVLDIMLPGIDGYQVCKRLREDGRSEVPILMLT
ARDALDDRLKGLNAGADDYLIKPFALSELVARIEAILRRSRGSRKRQLQVADLSYDLDTLHVSRAGQSLKLNPLGLKLLA
ILMQRSPAVVRREALEEALWGDDCPDSDSLRSHVHQLRQVLDKPFPTPLLHTIHGVGYRLAESADAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 7e-33 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MDS_2290 YP_004380073.1 two component transcriptional regulator BAC0125 Protein 3e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MDS_2290 YP_004380073.1 two component transcriptional regulator VFG0596 Protein 3e-33 42