Gene Information

Name : MDS_2241 (MDS_2241)
Accession : YP_004380024.1
Strain : Pseudomonas mendocina NK-01
Genome accession: NC_015410
Putative virulence/resistance : Unknown
Product : aminotransferase AlaT
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : -
Position : 2448393 - 2449604 bp
Length : 1212 bp
Strand : -
Note : -

DNA sequence :
ATGCAGGTCAGCAAATCGAACAAGCTCGCCAACGTCTGCTACGACATTCGCGGGCCGGTGCTCAAGCACGCCAAGCGTCT
GGAGGAGGAAGGCCATCGCATCCTCAAGCTGAATATCGGCAACCCGGCGCCGTTCGGTTTCGAAGCGCCGGAAGAAATTC
TCCAGGACGTCATCCGCAACCTGCCTACGGCGCAGGGCTACAGTGACTCAAAGGGCCTGTTCAGCGCGCGCAAGGCGGTG
ATGCAGTACTACCAGCAGAAGCAGGTCGAAGGCGTCACCATCGAAGACATCTACCTCGGCAACGGTGTGTCCGAGCTGAT
CGTCATGGCCATGCAGGCGCTGCTCAACAACGGTGACGAAGTGCTTATCCCGGCGCCTGACTATCCGCTGTGGACCGCTG
CAGTGGCGCTGTCCGGCGGCAAGCCGGTGCACTACCTGTGCGACGAGCAAGCCGGCTGGTTCCCGGATATTGCCGACATG
CGCGCCAAGATCACACCGAACACCAAGGCACTGGTGCTGATCAACCCGAACAACCCCACCGGTGCGGTGTACTCGAAAGA
AGTCCTGCAGGACATCGTCGAACTGGCCCGCCAGCACAACCTGGTGATCTTCTCCGACGAGATTTACGACAAGATCCTAT
ACGACGAAGCCGTGCACATCAGCACCGCGTCATTGGCCCCGGACGTGCTCTGCCTGACCTTCAACGGCTTGTCCAAGAGC
TACCGCGTGGCCGGCTTCCGCTCCGGCTGGGTGGCCATCTCCGGGCCCAAGCACAAGGCGCAGAGCTACATCGAAGGCCT
GGACATCCTGGCCAACATGCGCCTGTGCGCCAACGTGCCGAGCCAGCATGCGATCCAGACCGCACTCGGCGGCTACCAGA
GCATCAACGACCTAGTGCTGCCCAACGGCCGCCTGCTGGAGCAGCGCAACCGCGCCTGGGAGCTGCTCAACGACATCCCT
GGGGTGAGCTGCGTCAAACCCATGGGCGCGCTGTACGCCTTCCCGAAGATCGATCCGAAGGTTTGTCCAATTCACAACGA
CGAGAAATTCGTGCTCGATCTGCTGCTTTCCGAAAAGCTGTTGATCGTCCAGGGCACCGCCTTCAACTGGCCGTGGCCGG
ATCACTTCCGCGTGGTCACCCTACCCCGCGTCGACGATCTGGAACAGGCCATCGGCCGTATCGGCAACTTCCTCAAGACC
TACCGCCAGTAG

Protein sequence :
MQVSKSNKLANVCYDIRGPVLKHAKRLEEEGHRILKLNIGNPAPFGFEAPEEILQDVIRNLPTAQGYSDSKGLFSARKAV
MQYYQQKQVEGVTIEDIYLGNGVSELIVMAMQALLNNGDEVLIPAPDYPLWTAAVALSGGKPVHYLCDEQAGWFPDIADM
RAKITPNTKALVLINPNNPTGAVYSKEVLQDIVELARQHNLVIFSDEIYDKILYDEAVHISTASLAPDVLCLTFNGLSKS
YRVAGFRSGWVAISGPKHKAQSYIEGLDILANMRLCANVPSQHAIQTALGGYQSINDLVLPNGRLLEQRNRAWELLNDIP
GVSCVKPMGALYAFPKIDPKVCPIHNDEKFVLDLLLSEKLLIVQGTAFNWPWPDHFRVVTLPRVDDLEQAIGRIGNFLKT
YRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 1e-129 65
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 1e-129 65
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 1e-129 65
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 1e-129 65