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Name : MDS_2200 (MDS_2200) Accession : YP_004379983.1 Strain : Pseudomonas mendocina NK-01 Genome accession: NC_015410 Putative virulence/resistance : Unknown Product : portal vertex protein Function : - COG functional category : R : General function prediction only COG ID : COG5518 EC number : - Position : 2402905 - 2403966 bp Length : 1062 bp Strand : + Note : - DNA sequence : ATGAGCAGGAAACGGAGTCGCGGCCAGCAGGTTGCTGTTGCCAAGCCGGCGCTTGAGGGCGAGGTGTTGACCGCGCAGGG CGCTGCAGGCGCGCAGGCCTTCACGTTCGGCGACCCGACGCCGGTGCTGGATGGGCGCGAGATTCTTGACTATCTCGAGT GCTGGGCCAACGGGCGGTGGTACGAGCCGCCGGTTTCGCTGGATGGGTTGGCGCGGTCGACCAAGGCAAGCGTCTATCTG CAATCGGGCCTGAACTTCCGCCGCAACATGCTGGTGCGGACGTTCAAGCCGCACAGGCTGCTGAGCCGCCAGACCTTCGA GCAGTTCGCCATGGATTGGGGCTGGAGCGGCAATGCCTATCTCGAGAAGACCGATAACATGCTGCGCCAGGCGATGGGGT TGAAGCCGGTGCTGGCGAAGTACGTGCGCCGGGGCGTGGATCTCGACAGCTACTACCAGGTGCGCGGCTGGAAGGATGAG CACGAGTTCAAGACCGGCAGCATTTGCCACGTGCGCGAGGCCGATATCAATCAGGAGATTTACGGGTTGCCCGAGTGGAT GGCGGCGCTGCAGAGCGCGCTGCTGAACGAGAGCGCCACGTTGTTCCGTCGCAAGTACTACCAGAACGGCAGCCATGCCG GGTTCATCCTGTACATGCACGACGCGGTGCAGGACGAGAGTTTCGTCACCGATCTGCGCGAGGCGATGAAGAACAGCAAA GGGCCGGGCAACTTCCGCAACCTGTTCATGTACGCACCTGGTGGGAAGAAGGACGGCATTCAGCTAATCCCCATCAGTGA GGTAGCGGCCAAGGATGACTTCGGTGCCATCAAGAACATCAGTCGCGACGACTTGCTCGCGGCGCTGCGCATTCCGCCGC AGTTGATGGGCATCGTGCCGCAGAACGCTGGCGGCTTTGGCTCGATCAAGGACGCTGCAGCCATCTGGGCCATGAACGAA CTGGAGCCCATCCAGGCCAAGCTGCTACAGGTGAATGAGTGGCTGGGCGAAGAGGTCATCCGCTTCGACGAGTTCAGGCT CCCCGGCACCACTGACAGCTGA Protein sequence : MSRKRSRGQQVAVAKPALEGEVLTAQGAAGAQAFTFGDPTPVLDGREILDYLECWANGRWYEPPVSLDGLARSTKASVYL QSGLNFRRNMLVRTFKPHRLLSRQTFEQFAMDWGWSGNAYLEKTDNMLRQAMGLKPVLAKYVRRGVDLDSYYQVRGWKDE HEFKTGSICHVREADINQEIYGLPEWMAALQSALLNESATLFRRKYYQNGSHAGFILYMHDAVQDESFVTDLREAMKNSK GPGNFRNLFMYAPGGKKDGIQLIPISEVAAKDDFGAIKNISRDDLLAALRIPPQLMGIVPQNAGGFGSIKDAAAIWAMNE LEPIQAKLLQVNEWLGEEVIRFDEFRLPGTTDS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13463.1 | predicted capsid packaging protein | Not tested | PAGI-6 | Protein | 2e-111 | 68 |
| STY4628 | NP_458710.1 | probable capsid portal protein | Not tested | SPI-7 | Protein | 6e-90 | 58 |
| t4321 | NP_807917.1 | capsid portal protein | Not tested | SPI-7 | Protein | 6e-90 | 58 |
