Gene Information

Name : MDS_2197 (MDS_2197)
Accession : YP_004379980.1
Strain : Pseudomonas mendocina NK-01
Genome accession: NC_015410
Putative virulence/resistance : Unknown
Product : phage P2 major capsid gpN-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2399101 - 2400108 bp
Length : 1008 bp
Strand : -
Note : -

DNA sequence :
ATGCGCAACGATACCCGTAAGCTCTACAACGCCTACCTGCAACAGCTGGCCGCCCTCAACGGCGTCGACGACGTAACCAC
CAAATTCGCCGTGGAGCCGAGCGTCGCCCAGAAGCTCGAAAGCCGCATTCAGGAATCCAGCGACTTCCTGTCCAAGATCA
ATATCACCCCTGTGCGTGACCAGGCCGGTGACAAGGTTGGCCTAGGCATTTCCGGCCCGGTGGCCAGCACTACCGACACC
AACACCCAGGACCGCCAGACCCGCGACCTCAGCTCGCTGGACGAACGCGGCTACTTCGCGACCCAGACCAATTTCGACAC
CCACATCCGCTACGCCAAACTGGATCAGTGGGCCAAATTCCCCGACTTCCAGGCACGTATCCGCGACGCCATCATCAAAC
GCAGCGCGCTCGATCGCATCATGATCGGCTGGAACGGCACCGCCCGCGCCGCCACCTCCGACCCGGTTGCCAACCCGCTC
CTGCAGGACGTCAACATCGGCTGGCTGCAGAAAATGCGCGCCGAGAACGCCGCCCGCGTCATGACTGAGGTACAAGCGGC
CAGCGGTAAGATCCAAATCGGCGCTGGCAAGGACTTCGAGAATCTCGACGCCCTGGTCTACGCCATGGTCAACGAGTTCC
TGGAACCCTGGTATCAGGAAGATTCCGAGTTGGTGGTCATCTGCGGTCGCAAGCTGCTGGCCGACAAGTACTTCCCCATC
GTCAACCAGAGCCACGCCCCGACCGAGACCCTGGCGGCCGACTTGGTCATCAGCCAGAAGCGCATCGGCAACTTGCCGGC
CGTTCGCGTGCCGTACTTCCCGCCGAACGCCCTGATGATTACCCGCCTCGACAACCTGTCCATCTACCCACAGGAAGGCA
CACGCCGGCGCACCGTAGTGGACAACGCCAAGCGCGACCGCATCGAAAACTACGAGTCGGTCAACGAAGCCTACGTCGTT
GAAGACCTGGGTTGCGCCGCCCAGGCCGAAAACATCGAGCTGAGCTGA

Protein sequence :
MRNDTRKLYNAYLQQLAALNGVDDVTTKFAVEPSVAQKLESRIQESSDFLSKINITPVRDQAGDKVGLGISGPVASTTDT
NTQDRQTRDLSSLDERGYFATQTNFDTHIRYAKLDQWAKFPDFQARIRDAIIKRSALDRIMIGWNGTARAATSDPVANPL
LQDVNIGWLQKMRAENAARVMTEVQAASGKIQIGAGKDFENLDALVYAMVNEFLEPWYQEDSELVVICGRKLLADKYFPI
VNQSHAPTETLAADLVISQKRIGNLPAVRVPYFPPNALMITRLDNLSIYPQEGTRRRTVVDNAKRDRIENYESVNEAYVV
EDLGCAAQAENIELS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4625 NP_458707.1 putative major capsid protein Not tested SPI-7 Protein 2e-84 59
t4319 NP_807914.1 major capsid protein Not tested SPI-7 Protein 2e-84 59
unnamed ABR13466.1 predicted major capsid protein Not tested PAGI-6 Protein 1e-74 56