Gene Information

Name : MDS_2177 (MDS_2177)
Accession : YP_004379960.1
Strain : Pseudomonas mendocina NK-01
Genome accession: NC_015410
Putative virulence/resistance : Unknown
Product : phage tail fiber protein
Function : -
COG functional category : S : Function unknown
COG ID : COG5283
EC number : -
Position : 2384959 - 2387511 bp
Length : 2553 bp
Strand : -
Note : -

DNA sequence :
ATGGCGCGCGATTTAAAACTACAGGTGGTACTGCAAGGGCTTAACCGCGCCAGCAAGCCCTTCCGCGAAGCCGGCCGCAG
CGCCATCGGCCTCGGCCGCGACCTCAAGGCCACCCGCACCGAACTCAAGGGCCTGCAGGCCCAGCAAAGCGACATCAGCA
GCTTCCGCGCGCTCAAGGGCCAAACCGAGCAAACCGGCAAGGCCATGCAGGCCAGCCGCGACAAGGTGCGCCAGCTTTCG
CAACAGCTGGCCAACACCGCCACGCCTACCAAGGCGCTCAATCAGCAGTTTCAACGTACTGTACGTGAGGCCACCGCCCT
CAAGGCCAAGCACGCCGAGCAACAGCGCGAGCTGCAGGGCCTGCGCGGCAAACTCAGTGCCGCCGGCATCAGTACCGCCC
AACTTGGCCAGGCCGAGCGCGACCTCAAGGCCAAGGTCACCGCCACCAACCAAGCCATGGCCACACAAGAGGCCAGGCTA
AAGCGCCTCACCGCCCAGCAGCAACGCCTGGCCAGGGCAAAGGACCAATACCAGCGCACCCAAGCCTTGGCCGGCAGCAT
GGCCGCAACCGGCGCCGGCGGCCTGGCCACCGGTAGCGGCATCCTCTACACCGGCTCACGCCTGCTCGCTCCGGGGCTCG
ACTTCGACACCAGCATGAGCAAAGTGCAGGCGCTCACCCGCCTCAGCGGCGACAGTGACGAACTCAAAGCCCTGCGCGAG
CAAGCACGCCAGCTCGGCGCCAGTACCCAGTTCACCGCCGGCAACGCGGCGGACGCCCAGGGCTTCCTGGCCATGGCCGG
CTTCAACCCTAATGCCATCCGCGCCGCCATGCCCGGCATGCTCGCCCTGGCCAAGGCCGGTGACAGCGAGCTGGCAGACA
CCGCTGACATTGCGTCCAACATCCTCACCGGCTTCAACCTCCAGGCCGGCGACATGGGCCGCGTGGGTGACGTCCTGGTC
GGCGCCTTCACCCGCTCCAACACCAACCTGCAAATGCTCGGCGAAACCATGAAGTACGTGGCGCCCGTTGCAGCAGGCGT
CGGCCAAGACATCGAAACCATGGCCGCCATGGCCGGCAAGCTGGGCGATGCCGGCATCCAGGGCAGCATGGGCGGCACTG
CCCTACGCGCGATCATCAGTCGCCTGGCAGCGCCGCCGAAAATGGCGGCCGACGCTCTCAACGAGCTCGGTATCAGCGCC
AAGGACTCGATGGGCAACATGCGCGACATGCCCACCGTGCTGCAGGAGATCTACGAAAAAACCAAGGCCATGGGTGACGC
CGAGCGCTCGGGCTTCCTCAAGGGCATCGCCGGCGAGGAAGCATTCAGCGGCCTGCAGGTCCTGGTGCAACAGGCTGGCA
ATGGCGAGCTGCAAAAATTCATCGGCACCCTGCGCGAAACCAAGGGCGAAGCCGAAGAAGTCGCCCGCGTCATGGGCGAC
AACCTGCGCGGCGACCTCAAGGCCCTCGGCAGCGCCTGGGAAGACCTTGGCATCCAGATCAGCGACCAGCAGAACGGCCC
GCTGCGCGGCATCACCCAGGGCATCACCAAAGTTATCGGCAGCGTCAAAACCTGGGTCGCCGAGAACCCCAAACTGGCCA
GCCAACTGGTCAAAACCGCCGCAGGCCTCGGCATCGTCATGGCCGGCATGGGCGGGCTGACGCTGGCCATGGCCAGCATC
CTCGGCCCGTTCGCCATGGTGCGCTACGGCATGATGCTGTTCGGTATCCGTGGCGCCGGCCTGGCCAGCACCCTATTCAG
CCTCGGCAAAGTCGCCCTACCGCTGGTGGCCACCGGGCTGCGTGCCCTCGCTGTGGCCGCTATGGCCAACCCCATCTTGG
CGCTTATCACCGGTATCGTCGTCGGCGCCGGGCTCATCTACGAGCACTGGGACGGCATCAGCGCCTTCTTCGGCAGCGTG
TGGTCAGAGATCAAGACAGCCTTCGATGGTGGCCTGGTCGGCATCGCGGGCCTGCTGCTCAAGTGGAACCCGCTGAACCT
GTTCCGTAACGCCTTCACCGGCGTCATGAACTACTTCGGCATCGACATGCCCGCCCGTTTCAGCGAGTTTGGCGGCTTCC
TGGTGCAAGGCCTGATCGACGGTTTTACCAGCATGTTCCCCCGCGTCACAGCGCTGATCAGCGGCGCAGCTGACAGCATC
ATCACCACCTTCAAAGGCCTGCTCGGCATCCACAGCCCGTCCCGCGTGTTCGCCGAACTTGGCGGCTACACCATGCAGGG
CTATGGTCAGGGCCTGCTGGCCGAGCAAAGCAACCCGCTCAGTGCCCTGCAGCGCATCGGCAACAACCTGGTGGCCGCCG
GCAGCCAGACCATCGGCGGCCAGGTCGCCTTCGATGCACGCGCCCCACTGGCAGCGGCCGGCACCGACCGCAACACCGGC
AGGCCCATCGTCATCGAGGGCGACACCATCCAAATCACCATCGAAGGCGGCGGCGATATCGCCAGCATGCGCCGCATGCT
CGAGCAACTGCTCACCGAGCGCGAACGCGCCAAGGCCGCCCGCATGCGCTCCGCGCTGTATGACCAGGAGTAA

Protein sequence :
MARDLKLQVVLQGLNRASKPFREAGRSAIGLGRDLKATRTELKGLQAQQSDISSFRALKGQTEQTGKAMQASRDKVRQLS
QQLANTATPTKALNQQFQRTVREATALKAKHAEQQRELQGLRGKLSAAGISTAQLGQAERDLKAKVTATNQAMATQEARL
KRLTAQQQRLARAKDQYQRTQALAGSMAATGAGGLATGSGILYTGSRLLAPGLDFDTSMSKVQALTRLSGDSDELKALRE
QARQLGASTQFTAGNAADAQGFLAMAGFNPNAIRAAMPGMLALAKAGDSELADTADIASNILTGFNLQAGDMGRVGDVLV
GAFTRSNTNLQMLGETMKYVAPVAAGVGQDIETMAAMAGKLGDAGIQGSMGGTALRAIISRLAAPPKMAADALNELGISA
KDSMGNMRDMPTVLQEIYEKTKAMGDAERSGFLKGIAGEEAFSGLQVLVQQAGNGELQKFIGTLRETKGEAEEVARVMGD
NLRGDLKALGSAWEDLGIQISDQQNGPLRGITQGITKVIGSVKTWVAENPKLASQLVKTAAGLGIVMAGMGGLTLAMASI
LGPFAMVRYGMMLFGIRGAGLASTLFSLGKVALPLVATGLRALAVAAMANPILALITGIVVGAGLIYEHWDGISAFFGSV
WSEIKTAFDGGLVGIAGLLLKWNPLNLFRNAFTGVMNYFGIDMPARFSEFGGFLVQGLIDGFTSMFPRVTALISGAADSI
ITTFKGLLGIHSPSRVFAELGGYTMQGYGQGLLAEQSNPLSALQRIGNNLVAAGSQTIGGQVAFDARAPLAAAGTDRNTG
RPIVIEGDTIQITIEGGGDIASMRRMLEQLLTERERAKAARMRSALYDQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13488.1 phage-related tail protein Not tested PAGI-6 Protein 6e-143 42